This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1pfi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:07, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1pfi.png|left|200px]]
 
-
{{STRUCTURE_1pfi| PDB=1pfi | SCENE= }}
+
==PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES==
-
 
+
<StructureSection load='1pfi' size='340' side='right'caption='[[1pfi]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
===PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1pfi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_virus_Pf1 Pseudomonas virus Pf1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PFI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PFI FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_8036516}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pfi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfi OCA], [https://pdbe.org/1pfi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pfi RCSB], [https://www.ebi.ac.uk/pdbsum/1pfi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pfi ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1pfi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_phage_pf1 Pseudomonas phage pf1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PFI OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/CAPSD_BPPF1 CAPSD_BPPF1] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane (By similarity).
==See Also==
==See Also==
-
*[[Virus coat protein|Virus coat protein]]
+
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
-
[[Category: Pseudomonas phage pf1]]
+
__TOC__
-
[[Category: Day, L A.]]
+
</StructureSection>
-
[[Category: Liu, D J.]]
+
[[Category: Large Structures]]
-
[[Category: Helical virus]]
+
[[Category: Pseudomonas virus Pf1]]
-
[[Category: Virus]]
+
[[Category: Day LA]]
 +
[[Category: Liu DJ]]

Current revision

PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES

PDB ID 1pfi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools