1q88

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:13, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1q88.png|left|200px]]
 
-
<!--
+
==Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (monoclinic form)==
-
The line below this paragraph, containing "STRUCTURE_1q88", creates the "Structure Box" on the page.
+
<StructureSection load='1q88' size='340' side='right'caption='[[1q88]], [[Resolution|resolution]] 2.42&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1q88]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q88 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.42&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q88 OCA], [https://pdbe.org/1q88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q88 RCSB], [https://www.ebi.ac.uk/pdbsum/1q88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q88 ProSAT]</span></td></tr>
-
{{STRUCTURE_1q88| PDB=1q88 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (monoclinic form)===
+
[https://www.uniprot.org/uniprot/Q95VR4_TRIVA Q95VR4_TRIVA]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14622596}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 14622596 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q8/1q88_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_14622596}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q88 ConSurf].
-
1Q88 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q88 OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:14622596</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Trichomonas vaginalis]]
[[Category: Trichomonas vaginalis]]
-
[[Category: Johnson, P J.]]
+
[[Category: Johnson PJ]]
-
[[Category: Schumacher, M A.]]
+
[[Category: Schumacher MA]]
-
[[Category: Core promoter]]
+
-
[[Category: Initiator]]
+
-
[[Category: Inr]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:25:48 2009''
+

Current revision

Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (monoclinic form)

PDB ID 1q88

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1q88"
Personal tools