This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1rea

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:22, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1rea.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF THE RECA PROTEIN-ADP COMPLEX==
-
The line below this paragraph, containing "STRUCTURE_1rea", creates the "Structure Box" on the page.
+
<StructureSection load='1rea' size='340' side='right'caption='[[1rea]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1rea]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. The April 2014 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''RecA and Rad51'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2014_4 10.2210/rcsb_pdb/mom_2014_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1REA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1REA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
-
{{STRUCTURE_1rea| PDB=1rea | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rea FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rea OCA], [https://pdbe.org/1rea PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rea RCSB], [https://www.ebi.ac.uk/pdbsum/1rea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rea ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RECA_ECOLI RECA_ECOLI] Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.[HAMAP-Rule:MF_00268]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/re/1rea_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rea ConSurf].
 +
<div style="clear:both"></div>
-
===STRUCTURE OF THE RECA PROTEIN-ADP COMPLEX===
+
==See Also==
-
 
+
*[[3D structures of recombinase A|3D structures of recombinase A]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_1731253}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 1731253 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_1731253}}
+
-
 
+
-
==About this Structure==
+
-
1REA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1REA OCA].
+
-
 
+
-
==Reference==
+
-
Structure of the recA protein-ADP complex., Story RM, Steitz TA, Nature. 1992 Jan 23;355(6358):374-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1731253 1731253]
+
-
[[Category: Deleted entry]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Steitz, T A.]]
+
[[Category: RCSB PDB Molecule of the Month]]
-
[[Category: Story, R M.]]
+
[[Category: RecA and Rad51]]
-
[[Category: Homologous recombination]]
+
[[Category: Steitz TA]]
-
[[Category: Self-cleavage stimulation]]
+
[[Category: Story RM]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 08:45:27 2008''
+

Current revision

STRUCTURE OF THE RECA PROTEIN-ADP COMPLEX

PDB ID 1rea

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools