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1rpi

From Proteopedia

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[[Image:1rpi.png|left|200px]]
 
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{{STRUCTURE_1rpi| PDB=1rpi | SCENE= }}
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==Crystal structures of a Multidrug-Resistant HIV-1 Protease Reveal an Expanded Active Site Cavity==
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<StructureSection load='1rpi' size='340' side='right'caption='[[1rpi]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
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===Crystal structures of a Multidrug-Resistant HIV-1 Protease Reveal an Expanded Active Site Cavity===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1rpi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RPI FirstGlance]. <br>
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{{ABSTRACT_PUBMED_14990731}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rpi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rpi OCA], [https://pdbe.org/1rpi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rpi RCSB], [https://www.ebi.ac.uk/pdbsum/1rpi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rpi ProSAT]</span></td></tr>
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[[1rpi]] is a 2 chain structure of [[Virus protease]] with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RPI OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9QM22_9HIV1 Q9QM22_9HIV1]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rp/1rpi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rpi ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Virus protease|Virus protease]]
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*[[Immunodeficiency virus protease 3D structures|Immunodeficiency virus protease 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:014990731</ref><references group="xtra"/>
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[[Category: HIV-1 retropepsin]]
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[[Category: Human immunodeficiency virus 1]]
[[Category: Human immunodeficiency virus 1]]
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[[Category: Koepke, J I.]]
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[[Category: Large Structures]]
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[[Category: Kovari, L C.]]
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[[Category: Koepke JI]]
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[[Category: Logsdon, B C.]]
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[[Category: Kovari LC]]
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[[Category: Martin, P.]]
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[[Category: Logsdon BC]]
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[[Category: Merigan, T C.]]
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[[Category: Martin P]]
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[[Category: Proteasa, G.]]
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[[Category: Merigan TC]]
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[[Category: Terlecky, S R.]]
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[[Category: Proteasa G]]
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[[Category: Vickrey, J F.]]
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[[Category: Terlecky SR]]
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[[Category: Wawrzak, Z.]]
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[[Category: Vickrey JF]]
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[[Category: Winters, M A.]]
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[[Category: Wawrzak Z]]
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[[Category: Aid]]
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[[Category: Winters MA]]
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[[Category: Aspartyl portease]]
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[[Category: Hiv protease]]
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[[Category: Hydrolase]]
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[[Category: Multi-drug resistance]]
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[[Category: Polyprotein]]
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Current revision

Crystal structures of a Multidrug-Resistant HIV-1 Protease Reveal an Expanded Active Site Cavity

PDB ID 1rpi

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