This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tp6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:40, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1tp6.jpg|left|200px]]
 
-
<!--
+
==1.5 A Crystal Structure of a NTF-2 Like Protein of Unknown Function PA1314 from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_1tp6", creates the "Structure Box" on the page.
+
<StructureSection load='1tp6' size='340' side='right'caption='[[1tp6]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1tp6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TP6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tp6 OCA], [https://pdbe.org/1tp6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tp6 RCSB], [https://www.ebi.ac.uk/pdbsum/1tp6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tp6 ProSAT], [https://www.topsan.org/Proteins/MCSG/1tp6 TOPSAN]</span></td></tr>
-
{{STRUCTURE_1tp6| PDB=1tp6 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''1.5 A Crystal Structure of a NTF-2 Like Protein of Unknown Function PA1314 from Pseudomonas aeruginosa'''
+
[https://www.uniprot.org/uniprot/Q9I430_PSEAE Q9I430_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1TP6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TP6 OCA].
+
<jmolCheckbox>
-
[[Category: Pseudomonas aeruginosa]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tp/1tp6_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tp6 ConSurf].
-
[[Category: Xu, L X.]]
+
<div style="clear:both"></div>
-
[[Category: Zhang, R.]]
+
__TOC__
-
[[Category: Savchenko, A.]]
+
</StructureSection>
-
[[Category: Alpha-beta sandwich]]
+
[[Category: Large Structures]]
-
[[Category: Mcsg]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Edwards A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Joachimiak A]]
-
[[Category: Pseudomonas aeruginosa]]
+
[[Category: Xu LX]]
-
[[Category: Psi]]
+
[[Category: Zhang R]]
-
[[Category: Structural genomic]]
+
[[Category: Savchenko A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 10:12:42 2008''
+

Current revision

1.5 A Crystal Structure of a NTF-2 Like Protein of Unknown Function PA1314 from Pseudomonas aeruginosa

PDB ID 1tp6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1tp6"
Personal tools