This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1u9p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1u9p" [edit=sysop:move=sysop])
Current revision (08:44, 14 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1u9p.png|left|200px]]
 
-
{{STRUCTURE_1u9p| PDB=1u9p | SCENE= }}
+
==Permuted single-chain Arc==
-
 
+
<StructureSection load='1u9p' size='340' side='right'caption='[[1u9p]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===Permuted single-chain Arc===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1u9p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U9P FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15689399}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u9p OCA], [https://pdbe.org/1u9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u9p RCSB], [https://www.ebi.ac.uk/pdbsum/1u9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u9p ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1u9p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U9P OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/RARC_BPP22 RARC_BPP22] This protein acts as a transcriptional repressor of its own gene arc and of gene ant.
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:015689399</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u9/1u9p_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u9p ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Cezairliyan, B O.]]
+
[[Category: Large Structures]]
-
[[Category: Cochrane, J C.]]
+
[[Category: Cezairliyan BO]]
-
[[Category: Grant, R A.]]
+
[[Category: Cochrane JC]]
-
[[Category: Sauer, R T.]]
+
[[Category: Grant RA]]
-
[[Category: Tabtiang, R K.]]
+
[[Category: Sauer RT]]
-
[[Category: Arc]]
+
[[Category: Tabtiang RK]]
-
[[Category: Parc]]
+
-
[[Category: Unknown function]]
+

Current revision

Permuted single-chain Arc

PDB ID 1u9p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1u9p"
Personal tools