This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1uok

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:45, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1uok.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE==
-
The line below this paragraph, containing "STRUCTURE_1uok", creates the "Structure Box" on the page.
+
<StructureSection load='1uok' size='340' side='right'caption='[[1uok]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1uok]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UOK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UOK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uok FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uok OCA], [https://pdbe.org/1uok PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uok RCSB], [https://www.ebi.ac.uk/pdbsum/1uok PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uok ProSAT]</span></td></tr>
-
{{STRUCTURE_1uok| PDB=1uok | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O16G_BACCE O16G_BACCE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uo/1uok_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uok ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE===
+
==See Also==
-
 
+
*[[Alpha-glucosidase 3D structures|Alpha-glucosidase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9193006}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 9193006 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9193006}}
+
-
 
+
-
==About this Structure==
+
-
1UOK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UOK OCA].
+
-
 
+
-
==Reference==
+
-
The refined crystal structure of Bacillus cereus oligo-1,6-glucosidase at 2.0 A resolution: structural characterization of proline-substitution sites for protein thermostabilization., Watanabe K, Hata Y, Kizaki H, Katsube Y, Suzuki Y, J Mol Biol. 1997 May 30;269(1):142-53. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9193006 9193006]
+
[[Category: Bacillus cereus]]
[[Category: Bacillus cereus]]
-
[[Category: Oligo-1,6-glucosidase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Hata Y]]
-
[[Category: Hata, Y.]]
+
[[Category: Katsube Y]]
-
[[Category: Katsube, Y.]]
+
[[Category: Kizaki H]]
-
[[Category: Kizaki, H.]]
+
[[Category: Suzuki Y]]
-
[[Category: Suzuki, Y.]]
+
[[Category: Watanabe K]]
-
[[Category: Watanabe, K.]]
+
-
[[Category: Glucosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Sugar degradation]]
+
-
[[Category: Tim-barrel glycosidase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:00:20 2008''
+

Current revision

CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE

PDB ID 1uok

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1uok"
Personal tools