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1uxy

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(New page: 200px<br /><applet load="1uxy" size="450" color="white" frame="true" align="right" spinBox="true" caption="1uxy, resolution 1.80&Aring;" /> '''MURB MUTANT WITH SER...)
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[[Image:1uxy.jpg|left|200px]]<br /><applet load="1uxy" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1uxy, resolution 1.80&Aring;" />
 
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'''MURB MUTANT WITH SER 229 REPLACED BY ALA, COMPLEX WITH ENOLPYRUVYL-UDP-N-ACETYLGLUCOSAMINE'''<br />
 
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==Overview==
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==MURB MUTANT WITH SER 229 REPLACED BY ALA, COMPLEX WITH ENOLPYRUVYL-UDP-N-ACETYLGLUCOSAMINE==
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MurB catalyzes the second committed step in the synthesis of, peptidoglycan, a key component of the bacterial cell wall. The crystal, structures of both a S229A mutant and wild-type MurB in the presence of, the substrate enolpyruvyl-UDP-N-acetylglucosamine were solved and refined, at 1.8 A resolution. The single point mutation of residue 229 from serine, to alanine eliminated a hydroxyl group which has previously been proposed, to play a critical role as a proton donor during the second half-reaction, of MurB, namely, reoxidation of FADH2 and reduction of the enolpyruvyl, substrate. The mutation also resulted in the loss of the water, molecule-hydrogen bonded to the serine hydroxyl in the wild-type structure, changing the hydrogen-bonding network with in the active site. Comparison, of the wild-type and S229A mutant structures confirms that the dramatic, kinetic defect of an approximately 10(7)-fold decrease observed for the, Ser 229 Ala mutant in the second half-reaction [Benson, T.E., Walsh, C.T., &amp; Massey, V. (1997) Biochemistry 36, 796-805] is a direct result of the, loss of the serine hydroxyl moiety rather than other nonspecific, active-site changes or general structural defects.
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<StructureSection load='1uxy' size='340' side='right'caption='[[1uxy]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[1uxy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UXY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UXY FirstGlance]. <br>
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1UXY is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with FAD and EPU as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/UDP-N-acetylmuramate_dehydrogenase UDP-N-acetylmuramate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.158 1.1.1.158] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1UXY OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPU:URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL)+BUTYRIC+ACID'>EPU</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
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==Reference==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uxy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uxy OCA], [https://pdbe.org/1uxy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uxy RCSB], [https://www.ebi.ac.uk/pdbsum/1uxy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uxy ProSAT]</span></td></tr>
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X-ray crystal structures of the S229A mutant and wild-type MurB in the presence of the substrate enolpyruvyl-UDP-N-acetylglucosamine at 1.8-A resolution., Benson TE, Walsh CT, Hogle JM, Biochemistry. 1997 Jan 28;36(4):806-11. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9020778 9020778]
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MURB_ECOLI MURB_ECOLI] Cell wall formation.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ux/1uxy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uxy ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: UDP-N-acetylmuramate dehydrogenase]]
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[[Category: Benson TE]]
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[[Category: Benson, T.E.]]
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[[Category: Hogle JM]]
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[[Category: Hogle, J.M.]]
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[[Category: Walsh CT]]
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[[Category: Walsh, C.T.]]
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[[Category: EPU]]
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[[Category: FAD]]
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[[Category: cell division]]
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[[Category: cell wall]]
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[[Category: fad]]
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[[Category: flavoprotein]]
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[[Category: nadp]]
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[[Category: oxidoreductase]]
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[[Category: peptidoglycan synthesis]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 04:21:25 2007''
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Current revision

MURB MUTANT WITH SER 229 REPLACED BY ALA, COMPLEX WITH ENOLPYRUVYL-UDP-N-ACETYLGLUCOSAMINE

PDB ID 1uxy

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