1vfr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:46, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_1vfr| PDB=1vfr | SCENE= }}
 
-
===THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI===
 
-
{{ABSTRACT_PUBMED_9654450}}
 
-
==Function==
+
==THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI==
-
[[http://www.uniprot.org/uniprot/FRA1_VIBFI FRA1_VIBFI]] Involved in bioluminescence. It is a good supplier of reduced flavin mononucleotide (FMNH2) to the bioluminescence reaction. Major FMN reductase. It is capable of using both NADH and NADPH as electron donors. As electron acceptor, FMN is the most effective, FAD is considerably effective, and riboflavin is the least effective.
+
<StructureSection load='1vfr' size='340' side='right'caption='[[1vfr]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1vfr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aliivibrio_fischeri Aliivibrio fischeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VFR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VFR FirstGlance]. <br>
-
[[1vfr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aliivibrio_fischeri Aliivibrio fischeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VFR OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-
==Reference==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vfr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vfr OCA], [https://pdbe.org/1vfr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vfr RCSB], [https://www.ebi.ac.uk/pdbsum/1vfr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vfr ProSAT]</span></td></tr>
-
<ref group="xtra">PMID:009654450</ref><references group="xtra"/><references/>
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FRA1_ALIFS FRA1_ALIFS] Involved in bioluminescence. It is a good supplier of reduced flavin mononucleotide (FMNH2) to the bioluminescence reaction. Major FMN reductase. It is capable of using both NADH and NADPH as electron donors. As electron acceptor, FMN is the most effective, FAD is considerably effective, and riboflavin is the least effective.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vf/1vfr_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vfr ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Aliivibrio fischeri]]
[[Category: Aliivibrio fischeri]]
-
[[Category: Adman, E T.]]
+
[[Category: Large Structures]]
-
[[Category: Kobori, T.]]
+
[[Category: Adman ET]]
-
[[Category: Koike, H.]]
+
[[Category: Kobori T]]
-
[[Category: Murphy, M E.P.]]
+
[[Category: Koike H]]
-
[[Category: Saigo, K.]]
+
[[Category: Murphy MEP]]
-
[[Category: Sasaki, H.]]
+
[[Category: Saigo K]]
-
[[Category: Tanokura, M.]]
+
[[Category: Sasaki H]]
-
[[Category: Zenno, S.]]
+
[[Category: Tanokura M]]
-
[[Category: Bioluminescence]]
+
[[Category: Zenno S]]
-
[[Category: Fmn]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Vibrio fischeri]]
+

Current revision

THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI

PDB ID 1vfr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vfr"
Personal tools