1vls

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:46, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1vls.png|left|200px]]
 
-
<!--
+
==LIGAND BINDING DOMAIN OF THE WILD-TYPE ASPARTATE RECEPTOR==
-
The line below this paragraph, containing "STRUCTURE_1vls", creates the "Structure Box" on the page.
+
<StructureSection load='1vls' size='340' side='right'caption='[[1vls]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1vls]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VLS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VLS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vls FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vls OCA], [https://pdbe.org/1vls PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vls RCSB], [https://www.ebi.ac.uk/pdbsum/1vls PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vls ProSAT]</span></td></tr>
-
{{STRUCTURE_1vls| PDB=1vls | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MCP2_SALTY MCP2_SALTY] Receptor for the attractant L-aspartate and related amino and dicarboxylic acids. Tar mediates taxis away from the repellents cobalt and nickel. Unlike in E.coli tar, it does not mediates maltose taxis. Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. Attractants increase the level of methylation while repellents decrease the level of methylation, the methyl groups are added by the methyltransferase CheR and removed by the methylesterase CheB.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/1vls_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vls ConSurf].
 +
<div style="clear:both"></div>
-
===LIGAND BINDING DOMAIN OF THE WILD-TYPE ASPARTATE RECEPTOR===
+
==See Also==
-
 
+
*[[Chemotaxis protein 3D structures|Chemotaxis protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_8831788}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 8831788 is the PubMed ID number.
+
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-
-->
+
[[Category: Biemann H-P]]
-
{{ABSTRACT_PUBMED_8831788}}
+
[[Category: Kim S-H]]
-
 
+
[[Category: Koshland Junior DE]]
-
==About this Structure==
+
[[Category: Pandit J]]
-
1VLS is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VLS OCA].
+
[[Category: Prive G]]
-
 
+
[[Category: Yeh JI]]
-
==Reference==
+
-
<ref group="xtra">PMID:8831788</ref><references group="xtra"/>
+
-
[[Category: Salmonella typhimurium]]
+
-
[[Category: Biemann, H P.]]
+
-
[[Category: Junior, D E.Koshland.]]
+
-
[[Category: Kim, S H.]]
+
-
[[Category: Pandit, J.]]
+
-
[[Category: Prive, G.]]
+
-
[[Category: Yeh, J I.]]
+
-
[[Category: Bacterial chemotaxis receptor]]
+
-
[[Category: Chemotaxis]]
+
-
[[Category: Unbound]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 16:55:36 2009''
+

Current revision

LIGAND BINDING DOMAIN OF THE WILD-TYPE ASPARTATE RECEPTOR

PDB ID 1vls

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1vls"
Personal tools