1w8h
From Proteopedia
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- | [[Image:1w8h.gif|left|200px]]<br /><applet load="1w8h" size="350" color="white" frame="true" align="right" spinBox="true" | ||
- | caption="1w8h, resolution 1.75Å" /> | ||
- | '''STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN II (PA-IIL) COMPLEXED WITH LEWISA TRISACCHARIDE'''<br /> | ||
- | == | + | ==structure of pseudomonas aeruginosa lectin II (PA-IIL)complexed with lewisA trisaccharide== |
- | + | <StructureSection load='1w8h' size='340' side='right'caption='[[1w8h]], [[Resolution|resolution]] 1.75Å' scene=''> | |
- | + | == Structural highlights == | |
- | == | + | <table><tr><td colspan='2'>[[1w8h]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W8H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W8H FirstGlance]. <br> |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75Å</td></tr> | |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
- | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w8h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w8h OCA], [https://pdbe.org/1w8h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w8h RCSB], [https://www.ebi.ac.uk/pdbsum/1w8h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w8h ProSAT]</span></td></tr> |
- | + | </table> | |
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9HYN5_PSEAE Q9HYN5_PSEAE] | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w8/1w8h_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1w8h ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
- | + | [[Category: Bovin N]] | |
- | [[Category: Bovin | + | [[Category: Budova M]] |
- | [[Category: Budova | + | [[Category: Desmadril M]] |
- | [[Category: Desmadril | + | [[Category: Dumon C]] |
- | [[Category: Dumon | + | [[Category: Galanina O]] |
- | [[Category: Galanina | + | [[Category: Gautier C]] |
- | [[Category: Gautier | + | [[Category: Gilboa-Garber N]] |
- | [[Category: Gilboa-Garber | + | [[Category: Ilia S]] |
- | [[Category: Ilia | + | [[Category: Imberty A]] |
- | [[Category: Imberty | + | [[Category: Mitchell EP]] |
- | [[Category: Mitchell | + | [[Category: Nicaise M]] |
- | [[Category: Nicaise | + | [[Category: Perret S]] |
- | [[Category: Perret | + | [[Category: Sabin C]] |
- | [[Category: Sabin | + | [[Category: Wimmerova M]] |
- | [[Category: Wimmerova | + | |
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Current revision
structure of pseudomonas aeruginosa lectin II (PA-IIL)complexed with lewisA trisaccharide
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Categories: Large Structures | Pseudomonas aeruginosa | Bovin N | Budova M | Desmadril M | Dumon C | Galanina O | Gautier C | Gilboa-Garber N | Ilia S | Imberty A | Mitchell EP | Nicaise M | Perret S | Sabin C | Wimmerova M