1xim
From Proteopedia
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| - | [[Image:1xim.png|left|200px]] | ||
| - | + | ==ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS== | |
| - | + | <StructureSection load='1xim' size='340' side='right'caption='[[1xim]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1xim]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinoplanes_missouriensis Actinoplanes missouriensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XIM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XIM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=XYL:D-XYLITOL'>XYL</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xim FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xim OCA], [https://pdbe.org/1xim PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xim RCSB], [https://www.ebi.ac.uk/pdbsum/1xim PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xim ProSAT]</span></td></tr> |
| - | [[1xim]] is a 4 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/XYLA_ACTM4 XYLA_ACTM4] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/1xim_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xim ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[D-xylose isomerase|D-xylose isomerase]] | + | *[[D-xylose isomerase 3D structures|D-xylose isomerase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | ||
[[Category: Actinoplanes missouriensis]] | [[Category: Actinoplanes missouriensis]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Chiadmi M]] | |
| - | [[Category: Chiadmi | + | [[Category: Demaeyer M]] |
| - | [[Category: Demaeyer | + | [[Category: Janin J]] |
| - | + | [[Category: Jenkins J]] | |
| - | [[Category: Janin | + | [[Category: Lambeir A-M]] |
| - | [[Category: Jenkins | + | [[Category: Laroche Y]] |
| - | [[Category: Lambeir | + | [[Category: Lasters I]] |
| - | [[Category: Laroche | + | [[Category: Matthyssens G]] |
| - | [[Category: Lasters | + | [[Category: Mrabet NT]] |
| - | [[Category: Matthyssens | + | [[Category: Quax WJ]] |
| - | [[Category: Mrabet | + | [[Category: Rey F]] |
| - | [[Category: Quax | + | [[Category: Stanssens P]] |
| - | [[Category: Rey | + | [[Category: Van Den Brande I]] |
| - | [[Category: Stanssens | + | [[Category: Van Denbroek A]] |
| - | [[Category: Vantilbeurgh | + | [[Category: Vantilbeurgh H]] |
| - | [[Category: Wodak | + | [[Category: Wodak SJ]] |
Current revision
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
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