This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1y6i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1y6i" [edit=sysop:move=sysop])
Current revision (08:55, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1y6i.png|left|200px]]
 
-
{{STRUCTURE_1y6i| PDB=1y6i | SCENE= }}
+
==Synechocystis GUN4==
-
 
+
<StructureSection load='1y6i' size='340' side='right'caption='[[1y6i]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-
===Synechocystis GUN4===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1y6i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y6I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y6I FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15884974}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y6i OCA], [https://pdbe.org/1y6i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y6i RCSB], [https://www.ebi.ac.uk/pdbsum/1y6i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y6i ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1y6i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y6I OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YC53L_SYNY3 YC53L_SYNY3]
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:015884974</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Synechocystis sp.]]
+
Check<jmol>
-
[[Category: Chory, J.]]
+
<jmolCheckbox>
-
[[Category: Ferrer, J L.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y6/1y6i_consurf.spt"</scriptWhenChecked>
-
[[Category: Larkin, R M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Noel, J P.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Riek, R.]]
+
</jmolCheckbox>
-
[[Category: Verdecia, M A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y6i ConSurf].
-
[[Category: Helix-bundle]]
+
<div style="clear:both"></div>
-
[[Category: Ligand binding protein]]
+
__TOC__
-
[[Category: Porphyrin binding]]
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Synechocystis sp. PCC 6803]]
 +
[[Category: Chory J]]
 +
[[Category: Ferrer JL]]
 +
[[Category: Larkin RM]]
 +
[[Category: Noel JP]]
 +
[[Category: Riek R]]
 +
[[Category: Verdecia MA]]

Current revision

Synechocystis GUN4

PDB ID 1y6i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1y6i"
Personal tools