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1y80

From Proteopedia

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[[Image:1y80.gif|left|200px]]
 
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{{Structure
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==Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica==
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|PDB= 1y80 |SIZE=350|CAPTION= <scene name='initialview01'>1y80</scene>, resolution 1.70&Aring;
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<StructureSection load='1y80' size='340' side='right'caption='[[1y80]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=B1M:CO-5-METHOXYBENZIMIDAZOLYLCOBAMIDE'>B1M</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>
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<table><tr><td colspan='2'>[[1y80]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y80 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B1M:CO-5-METHOXYBENZIMIDAZOLYLCOBAMIDE'>B1M</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5012 COG5012], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02070 corrinoid_protein_B12-BD]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y80 OCA], [https://pdbe.org/1y80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y80 RCSB], [https://www.ebi.ac.uk/pdbsum/1y80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y80 ProSAT], [https://www.topsan.org/Proteins/SECSG/1y80 TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y80 OCA], [http://www.ebi.ac.uk/pdbsum/1y80 PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=1y80 RCSB]</span>
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</table>
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}}
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== Function ==
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[https://www.uniprot.org/uniprot/Q2RJ67_MOOTA Q2RJ67_MOOTA]
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'''Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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1Y80 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y80 OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y8/1y80_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y80 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Moorella thermoacetica]]
[[Category: Moorella thermoacetica]]
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[[Category: Single protein]]
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[[Category: Chang J]]
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[[Category: Chang, J.]]
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[[Category: Chang S-H]]
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[[Category: Chang, S H.]]
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[[Category: Chen L]]
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[[Category: Chen, L.]]
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[[Category: Das A]]
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[[Category: Das, A.]]
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[[Category: Fu Z-Q]]
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[[Category: Fu, Z Q.]]
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[[Category: Habel J]]
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[[Category: Habel, J.]]
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[[Category: Lee D]]
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[[Category: Lee, D.]]
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[[Category: Liu Z-J]]
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[[Category: Liu, Z J.]]
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[[Category: Ljungdahl L]]
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[[Category: Ljungdahl, L.]]
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[[Category: Nguyen D]]
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[[Category: Nguyen, D.]]
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[[Category: Rose JP]]
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[[Category: Rose, J P.]]
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[[Category: Tempel W]]
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[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
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[[Category: Wang B-C]]
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[[Category: Tempel, W.]]
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[[Category: Zhou W]]
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[[Category: Wang, B C.]]
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[[Category: Zhou, W.]]
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[[Category: corrinoid]]
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[[Category: factor iiim]]
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[[Category: methyl transferase]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: secsg]]
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[[Category: southeast collaboratory for structural genomic]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:14:01 2008''
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Current revision

Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica

PDB ID 1y80

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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