This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1yco
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1yco" size="450" color="white" frame="true" align="right" spinBox="true" caption="1yco, resolution 2.40Å" /> '''Crystal structure of...) |
|||
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1yco.gif|left|200px]]<br /><applet load="1yco" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1yco, resolution 2.40Å" /> | ||
| - | '''Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583'''<br /> | ||
| - | == | + | ==Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583== |
| - | + | <StructureSection load='1yco' size='340' side='right'caption='[[1yco]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1yco]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YCO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YCO FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yco FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yco OCA], [https://pdbe.org/1yco PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yco RCSB], [https://www.ebi.ac.uk/pdbsum/1yco PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yco ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1yco TOPSAN]</span></td></tr> |
| - | [[ | + | </table> |
| - | [ | + | == Function == |
| - | [[Category: | + | [https://www.uniprot.org/uniprot/Q834I9_ENTFA Q834I9_ENTFA] |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yc/1yco_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yco ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Enterococcus faecalis V583]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Burley SK]] | ||
| + | [[Category: Kniewel R]] | ||
| + | [[Category: Lee K]] | ||
| + | [[Category: Lima CD]] | ||
| + | [[Category: Rajashankar KR]] | ||
Current revision
Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583
| |||||||||||
