1yre

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:59, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yre.gif|left|200px]]
 
-
{{Structure
+
==Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA==
-
|PDB= 1yre |SIZE=350|CAPTION= <scene name='initialview01'>1yre</scene>, resolution 2.15&Aring;
+
<StructureSection load='1yre' size='340' side='right'caption='[[1yre]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=COA:COENZYME A'>COA</scene>
+
<table><tr><td colspan='2'>[[1yre]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YRE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YRE FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yre FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yre OCA], [https://pdbe.org/1yre PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yre RCSB], [https://www.ebi.ac.uk/pdbsum/1yre PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yre ProSAT], [https://www.topsan.org/Proteins/MCSG/1yre TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9HYX1_PSEAE Q9HYX1_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1YRE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YRE OCA].
+
Check<jmol>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/1yre_consurf.spt"</scriptWhenChecked>
-
[[Category: Edwards, A M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Joachimiak, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Lunin, V V.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yre ConSurf].
-
[[Category: Osipiuk, J.]]
+
<div style="clear:both"></div>
-
[[Category: Savchenko, A.]]
+
__TOC__
-
[[Category: COA]]
+
</StructureSection>
-
[[Category: apc5563]]
+
[[Category: Large Structures]]
-
[[Category: mcsg]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Edwards AM]]
-
[[Category: mscg]]
+
[[Category: Joachimiak A]]
-
[[Category: pa3270]]
+
[[Category: Lunin VV]]
-
[[Category: protein structure initiative]]
+
[[Category: Osipiuk J]]
-
[[Category: psi]]
+
[[Category: Savchenko A]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:26:32 2008''
+

Current revision

Hypothetical protein PA3270 from Pseudomonas aeruginosa in complex with CoA

PDB ID 1yre

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools