This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ytl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:59, 14 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ytl.gif|left|200px]]<br /><applet load="1ytl" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1ytl, resolution 1.80&Aring;" />
 
-
'''Crystal Structure of Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2'''<br />
 
-
==About this Structure==
+
==Crystal Structure of Acetyl-CoA decarboxylase/synthase complex epsilon subunit 2==
-
1YTL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YTL OCA].
+
<StructureSection load='1ytl' size='340' side='right'caption='[[1ytl]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Archaeoglobus fulgidus]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1ytl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YTL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YTL FirstGlance]. <br>
-
[[Category: Chang, C.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Edwards, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ytl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ytl OCA], [https://pdbe.org/1ytl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ytl RCSB], [https://www.ebi.ac.uk/pdbsum/1ytl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ytl ProSAT], [https://www.topsan.org/Proteins/MCSG/1ytl TOPSAN]</span></td></tr>
-
[[Category: Evdokimova, E.]]
+
</table>
-
[[Category: Joachimiak, A.]]
+
== Function ==
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[https://www.uniprot.org/uniprot/ACDE2_ARCFU ACDE2_ARCFU] Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably has a structural role in stabilizing the alpha-epsilon subcomponent of the ACDS complex by forming a structural link between the two alpha subunits (By similarity).[HAMAP-Rule:MF_01134]
-
[[Category: Savchenko, A.]]
+
== Evolutionary Conservation ==
-
[[Category: acetyl-coa decarbonylase/synthase complex]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: mcsg]]
+
Check<jmol>
-
[[Category: midwest center for structural genomics]]
+
<jmolCheckbox>
-
[[Category: protein structure initiative]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yt/1ytl_consurf.spt"</scriptWhenChecked>
-
[[Category: psi]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: structural genomics]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ytl ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:08:57 2008''
+
==See Also==
 +
*[[Acetyl-CoA synthase 3D structures|Acetyl-CoA synthase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Archaeoglobus fulgidus]]
 +
[[Category: Large Structures]]
 +
[[Category: Chang C]]
 +
[[Category: Edwards A]]
 +
[[Category: Evdokimova E]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Savchenko A]]

Current revision

Crystal Structure of Acetyl-CoA decarboxylase/synthase complex epsilon subunit 2

PDB ID 1ytl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools