This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yve

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:00, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1yve.png|left|200px]]
 
-
<!--
+
==ACETOHYDROXY ACID ISOMEROREDUCTASE COMPLEXED WITH NADPH, MAGNESIUM AND INHIBITOR IPOHA (N-HYDROXY-N-ISOPROPYLOXAMATE)==
-
The line below this paragraph, containing "STRUCTURE_1yve", creates the "Structure Box" on the page.
+
<StructureSection load='1yve' size='340' side='right'caption='[[1yve]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1yve]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YVE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YVE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HIO:N-HYDROXY-N-ISOPROPYLOXAMIC+ACID'>HIO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
{{STRUCTURE_1yve| PDB=1yve | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yve FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yve OCA], [https://pdbe.org/1yve PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yve RCSB], [https://www.ebi.ac.uk/pdbsum/1yve PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yve ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ILV5_SPIOL ILV5_SPIOL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/1yve_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yve ConSurf].
 +
<div style="clear:both"></div>
-
===ACETOHYDROXY ACID ISOMEROREDUCTASE COMPLEXED WITH NADPH, MAGNESIUM AND INHIBITOR IPOHA (N-HYDROXY-N-ISOPROPYLOXAMATE)===
+
==See Also==
-
 
+
*[[Ketol-acid reductoisomerase 3D structures|Ketol-acid reductoisomerase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9218783}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 9218783 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9218783}}
+
-
 
+
-
==About this Structure==
+
-
1YVE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YVE OCA].
+
-
 
+
-
==Reference==
+
-
The crystal structure of plant acetohydroxy acid isomeroreductase complexed with NADPH, two magnesium ions and a herbicidal transition state analog determined at 1.65 A resolution., Biou V, Dumas R, Cohen-Addad C, Douce R, Job D, Pebay-Peyroula E, EMBO J. 1997 Jun 16;16(12):3405-15. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9218783 9218783]
+
-
[[Category: Ketol-acid reductoisomerase]]
+
-
[[Category: Single protein]]
+
[[Category: Spinacia oleracea]]
[[Category: Spinacia oleracea]]
-
[[Category: Biou, V.]]
+
[[Category: Biou V]]
-
[[Category: Cohen-Addad, C.]]
+
[[Category: Cohen-Addad C]]
-
[[Category: Douce, R.]]
+
[[Category: Douce R]]
-
[[Category: Dumas, R.]]
+
[[Category: Dumas R]]
-
[[Category: Job, D.]]
+
[[Category: Job D]]
-
[[Category: Pebay-Peyroula, E.]]
+
[[Category: Pebay-Peyroula E]]
-
[[Category: Branched-chain amino acid biosynthesis]]
+
-
[[Category: Chloroplast]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Nadp]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Transit peptide]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 13:59:11 2008''
+

Current revision

ACETOHYDROXY ACID ISOMEROREDUCTASE COMPLEXED WITH NADPH, MAGNESIUM AND INHIBITOR IPOHA (N-HYDROXY-N-ISOPROPYLOXAMATE)

PDB ID 1yve

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yve"
Personal tools