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1zc8

From Proteopedia

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{{Seed}}
 
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[[Image:1zc8.png|left|200px]]
 
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==Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex==
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The line below this paragraph, containing "STRUCTURE_1zc8", creates the "Structure Box" on the page.
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<SX load='1zc8' size='340' side='right' viewer='molstar' caption='[[1zc8]], [[Resolution|resolution]] 13.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1zc8]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZC8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 13&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc8 OCA], [https://pdbe.org/1zc8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zc8 RCSB], [https://www.ebi.ac.uk/pdbsum/1zc8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc8 ProSAT]</span></td></tr>
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{{STRUCTURE_1zc8| PDB=1zc8 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SSRP_AQUAE SSRP_AQUAE] Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zc8_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zc8 ConSurf].
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<div style="clear:both"></div>
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===Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex===
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==See Also==
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*[[Elongation factor 3D structures|Elongation factor 3D structures]]
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__TOC__
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<!--
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</SX>
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The line below this paragraph, {{ABSTRACT_PUBMED_12677067}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12677067 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12677067}}
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==About this Structure==
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1ZC8 is a 11 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC8 OCA].
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==Reference==
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<ref group="xtra">PMID:12677067</ref><references group="xtra"/>
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[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
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[[Category: Frank, J.]]
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[[Category: Frank J]]
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[[Category: Gillet, R.]]
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[[Category: Gillet R]]
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[[Category: Henne, A.]]
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[[Category: Henne A]]
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[[Category: Kaur, S.]]
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[[Category: Kaur S]]
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[[Category: Ramakrishnan, V.]]
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[[Category: Ramakrishnan V]]
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[[Category: Valle, M.]]
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[[Category: Valle M]]
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[[Category: 16s rrna]]
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[[Category: 30]]
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[[Category: 70]]
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[[Category: Cryo-em]]
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[[Category: Ef-tu]]
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[[Category: H44]]
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[[Category: Rna binding protein/rna complex]]
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[[Category: Smpb]]
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[[Category: Tmrna]]
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[[Category: Trans-translation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 12:13:10 2009''
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Current revision

Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex

1zc8, resolution 13.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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