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1zc8
From Proteopedia
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| - | {{STRUCTURE_1zc8| PDB=1zc8 | SCENE= }} | ||
| - | ===Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex=== | ||
| - | {{ABSTRACT_PUBMED_12677067}} | ||
| - | == | + | ==Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex== |
| - | [[1zc8]] is a | + | <SX load='1zc8' size='340' side='right' viewer='molstar' caption='[[1zc8]], [[Resolution|resolution]] 13.00Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1zc8]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZC8 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 13Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc8 OCA], [https://pdbe.org/1zc8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zc8 RCSB], [https://www.ebi.ac.uk/pdbsum/1zc8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc8 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SSRP_AQUAE SSRP_AQUAE] Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zc8_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zc8 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Elongation factor|Elongation factor]] | + | *[[Elongation factor 3D structures|Elongation factor 3D structures]] |
| - | + | __TOC__ | |
| - | + | </SX> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
| - | [[Category: Frank | + | [[Category: Frank J]] |
| - | [[Category: Gillet | + | [[Category: Gillet R]] |
| - | [[Category: Henne | + | [[Category: Henne A]] |
| - | [[Category: Kaur | + | [[Category: Kaur S]] |
| - | [[Category: Ramakrishnan | + | [[Category: Ramakrishnan V]] |
| - | [[Category: Valle | + | [[Category: Valle M]] |
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Current revision
Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex
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