This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2b45
From Proteopedia
(Difference between revisions)
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in free state== | ==Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in free state== | ||
| - | <StructureSection load='2b45' size='340' side='right' caption='[[2b45]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='2b45' size='340' side='right'caption='[[2b45]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2b45]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2b45]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B45 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B45 FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene></td></tr> | |
| - | <tr><td class="sblockLbl"><b>[[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b45 OCA], [https://pdbe.org/2b45 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b45 RCSB], [https://www.ebi.ac.uk/pdbsum/2b45 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b45 ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | == Function == |
| - | <table> | + | [https://www.uniprot.org/uniprot/XYNA_BACSU XYNA_BACSU] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b4/2b45_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b4/2b45_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b45 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Brijs | + | [[Category: Brijs K]] |
| - | [[Category: Courtin | + | [[Category: Courtin CM]] |
| - | [[Category: Delcour | + | [[Category: De Ranter CJ]] |
| - | [[Category: Dewilde | + | [[Category: Delcour JA]] |
| - | [[Category: Gebruers | + | [[Category: Dewilde M]] |
| - | [[Category: Rabijns | + | [[Category: Gebruers K]] |
| - | + | [[Category: Rabijns A]] | |
| - | [[Category: Sansen | + | [[Category: Sansen S]] |
| - | [[Category: Sibbesen | + | [[Category: Sibbesen O]] |
| - | [[Category: Sorensen | + | [[Category: Sorensen JF]] |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in free state
| |||||||||||
Categories: Bacillus subtilis | Large Structures | Brijs K | Courtin CM | De Ranter CJ | Delcour JA | Dewilde M | Gebruers K | Rabijns A | Sansen S | Sibbesen O | Sorensen JF

