This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f1s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2f1s" size="450" color="white" frame="true" align="right" spinBox="true" caption="2f1s, resolution 1.4&Aring;" /> '''Crystal Structure of ...)
Current revision (09:20, 14 February 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f1s.gif|left|200px]]<br /><applet load="2f1s" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2f1s, resolution 1.4&Aring;" />
 
-
'''Crystal Structure of a Viral FLIP MC159'''<br />
 
-
==Overview==
+
==Crystal Structure of a Viral FLIP MC159==
-
Death receptor signaling is initiated by the assembly of the, death-inducing signaling complex, which culminates in the activation of, the initiator caspase, either caspase-8 or caspase-10. A family of viral, and cellular proteins, known as FLIP, plays an essential role in the, regulation of death receptor signaling. Viral FLIP (v-FLIP) and short, cellular FLIP (c-FLIPS) inhibit apoptosis by interfering with death, receptor signaling. The structure and mechanisms of v-FLIP and c-FLIPS, remain largely unknown. Here we report a high resolution crystal structure, of MC159, a v-FLIP derived from the molluscum contagiosum virus, which is, a member of the human poxvirus family. Unexpectedly, the two tandem death, effector domains (DEDs) of MC159 rigidly associate with each other through, a hydrophobic interface. Structure-based sequence analysis suggests that, this interface is conserved in the tandem DEDs from other v-FLIP, c-FLIPS, and caspase-8 and -10. Strikingly, the overall packing arrangement between, the two DEDs of MC159 resembles that between the caspase recruitment, domains of Apaf-1 and caspase-9. In addition, each DED of MC159 contains a, highly conserved binding motif on the surface, to which loss-of-function, mutations in MC159 map. These observations, in conjunction with published, evidence, reveal significant insights into the function of v-FLIP and, suggest a mechanism by which v-FLIP and c-FLIPS inhibit death receptor, signaling.
+
<StructureSection load='2f1s' size='340' side='right'caption='[[2f1s]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[2f1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Molluscum_contagiosum_virus_subtype_1 Molluscum contagiosum virus subtype 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F1S FirstGlance]. <br>
-
2F1S is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Molluscum_contagiosum_virus_subtype_2 Molluscum contagiosum virus subtype 2]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2F1S OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f1s OCA], [https://pdbe.org/2f1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f1s RCSB], [https://www.ebi.ac.uk/pdbsum/2f1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f1s ProSAT]</span></td></tr>
-
==Reference==
+
</table>
-
Crystal structure of a viral FLIP: insights into FLIP-mediated inhibition of death receptor signaling., Li FY, Jeffrey PD, Yu JW, Shi Y, J Biol Chem. 2006 Feb 3;281(5):2960-8. Epub 2005 Nov 29. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16317000 16317000]
+
== Function ==
-
[[Category: Molluscum contagiosum virus subtype 2]]
+
[https://www.uniprot.org/uniprot/CFLA_MCV1 CFLA_MCV1] Inhibits TNFRSF1A, TNFRSF6 and TNFRSF12 induced apoptosis. May interfere with caspase-8 recruitment and activation at the death-inducing signaling complex (DISC). May lead to higher virus production and contribute to virus persistence and oncogenicity.<ref>PMID:9087414</ref> <ref>PMID:9037025</ref>
-
[[Category: Single protein]]
+
== Evolutionary Conservation ==
-
[[Category: Jeffrey, P.D.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Li, F.Y.]]
+
Check<jmol>
-
[[Category: Shi, Y.]]
+
<jmolCheckbox>
-
[[Category: Yu, J.W.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f1/2f1s_consurf.spt"</scriptWhenChecked>
-
[[Category: caspase activation]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: death receptor signaling]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: ded]]
+
</jmolCheckbox>
-
[[Category: disc]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f1s ConSurf].
-
[[Category: flip]]
+
<div style="clear:both"></div>
-
 
+
== References ==
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:18:27 2007''
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Molluscum contagiosum virus subtype 1]]
 +
[[Category: Jeffrey PD]]
 +
[[Category: Li F-Y]]
 +
[[Category: Shi Y]]
 +
[[Category: Yu JW]]

Current revision

Crystal Structure of a Viral FLIP MC159

PDB ID 2f1s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools