This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f3b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2f3b" size="450" color="white" frame="true" align="right" spinBox="true" caption="2f3b, resolution 1.800&Aring;" /> '''Mechanism of displa...)
Current revision (09:21, 14 February 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f3b.gif|left|200px]]<br /><applet load="2f3b" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2f3b, resolution 1.800&Aring;" />
 
-
'''Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase'''<br />
 
-
==About this Structure==
+
==Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase==
-
2F3B is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa] with F6P, PO4 and ZN as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Fructose-bisphosphatase Fructose-bisphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.11 3.1.3.11] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2F3B OCA].
+
<StructureSection load='2f3b' size='340' side='right'caption='[[2f3b]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Fructose-bisphosphatase]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2f3b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F3B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F3B FirstGlance]. <br>
-
[[Category: Sus scrofa]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Choe, J.Y.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F6P:FRUCTOSE-6-PHOSPHATE'>F6P</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Fromm, H.J.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f3b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f3b OCA], [https://pdbe.org/2f3b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f3b RCSB], [https://www.ebi.ac.uk/pdbsum/2f3b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f3b ProSAT]</span></td></tr>
-
[[Category: Honzatko, R.B.]]
+
</table>
-
[[Category: Iancu, C.V.]]
+
== Function ==
-
[[Category: Mukund, S.]]
+
[https://www.uniprot.org/uniprot/F16P1_PIG F16P1_PIG]
-
[[Category: F6P]]
+
== Evolutionary Conservation ==
-
[[Category: PO4]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: ZN]]
+
Check<jmol>
-
[[Category: 6-bisphosphatase]]
+
<jmolCheckbox>
-
[[Category: allosteric regulation]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f3/2f3b_consurf.spt"</scriptWhenChecked>
-
[[Category: allostery]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: enzyme catalysis]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: fbpase]]
+
</jmolCheckbox>
-
[[Category: fructose-1]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f3b ConSurf].
-
[[Category: loop diengagement]]
+
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:20:12 2007''
+
==See Also==
 +
*[[Fructose-1%2C6-bisphosphatase 3D structures|Fructose-1%2C6-bisphosphatase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Sus scrofa]]
 +
[[Category: Choe J-Y]]
 +
[[Category: Fromm HJ]]
 +
[[Category: Honzatko RB]]
 +
[[Category: Iancu CV]]
 +
[[Category: Mukund S]]

Current revision

Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase

PDB ID 2f3b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools