This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fzf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:25, 14 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fzf.gif|left|200px]]
 
-
{{Structure
+
==Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus==
-
|PDB= 2fzf |SIZE=350|CAPTION= <scene name='initialview01'>2fzf</scene>, resolution 2.700&Aring;
+
<StructureSection load='2fzf' size='340' side='right'caption='[[2fzf]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2fzf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZF FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
|GENE= PF1190 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fzf OCA], [https://pdbe.org/2fzf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fzf RCSB], [https://www.ebi.ac.uk/pdbsum/2fzf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fzf ProSAT], [https://www.topsan.org/Proteins/SECSG/2fzf TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01045 Ferritin_like_AB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02915 Rubrerythrin]</span>
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fzf OCA], [http://www.ebi.ac.uk/pdbsum/2fzf PDBsum], [http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=1kfv JenaLib], [http://www.rcsb.org/pdb/explore.do?structureId=2fzf RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q8U1L6_PYRFU Q8U1L6_PYRFU]
-
 
+
== Evolutionary Conservation ==
-
'''Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fzf_consurf.spt"</scriptWhenChecked>
-
2FZF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZF OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fzf ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Single protein]]
+
[[Category: Adams MWW]]
-
[[Category: Adams, M W.W.]]
+
[[Category: Chang J]]
-
[[Category: Chang, J.]]
+
[[Category: Chang S-H]]
-
[[Category: Chang, S H.]]
+
[[Category: Chen L]]
-
[[Category: Chen, L.]]
+
[[Category: Dillard BD]]
-
[[Category: Dillard, B D.]]
+
[[Category: Fu Z-Q]]
-
[[Category: Fu, Z Q.]]
+
[[Category: Habel J]]
-
[[Category: Habel, J.]]
+
[[Category: Horanyi P]]
-
[[Category: Horanyi, P.]]
+
[[Category: Jenney Jr FE]]
-
[[Category: Jr., F E.Jenney.]]
+
[[Category: Kelley L]]
-
[[Category: Kelley, L.]]
+
[[Category: Lee D]]
-
[[Category: Lee, D.]]
+
[[Category: Lee HS]]
-
[[Category: Lee, H S.]]
+
[[Category: Liu Z-J]]
-
[[Category: Liu, Z J.]]
+
[[Category: Nguyen D]]
-
[[Category: Nguyen, D.]]
+
[[Category: Poole FL]]
-
[[Category: Poole, F L.]]
+
[[Category: Rose JP]]
-
[[Category: Rose, J P.]]
+
[[Category: Shah N]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Sugar FJ]]
-
[[Category: Shah, N.]]
+
[[Category: Tempel W]]
-
[[Category: Sugar, F J.]]
+
[[Category: Wang B-C]]
-
[[Category: Tempel, W.]]
+
[[Category: Zhang H]]
-
[[Category: Wang, B C.]]
+
-
[[Category: Zhang, H.]]
+
-
[[Category: conserved hypothetical protein]]
+
-
[[Category: hyperthermophile]]
+
-
[[Category: pfu-1136390-001]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: pyrococcus furiosus]]
+
-
[[Category: secsg]]
+
-
[[Category: southeast collaboratory for structural genomic]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 26 06:25:39 2008''
+

Current revision

Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus

PDB ID 2fzf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools