This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fzf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:25, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fzf.gif|left|200px]]
 
-
<!--
+
==Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus==
-
The line below this paragraph, containing "STRUCTURE_2fzf", creates the "Structure Box" on the page.
+
<StructureSection load='2fzf' size='340' side='right'caption='[[2fzf]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fzf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fzf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fzf OCA], [https://pdbe.org/2fzf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fzf RCSB], [https://www.ebi.ac.uk/pdbsum/2fzf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fzf ProSAT], [https://www.topsan.org/Proteins/SECSG/2fzf TOPSAN]</span></td></tr>
-
{{STRUCTURE_2fzf| PDB=2fzf | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus'''
+
[https://www.uniprot.org/uniprot/Q8U1L6_PYRFU Q8U1L6_PYRFU]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2FZF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZF OCA].
+
<jmolCheckbox>
-
[[Category: Pyrococcus furiosus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fzf_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Adams, M W.W.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chang, J.]]
+
</jmolCheckbox>
-
[[Category: Chang, S H.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fzf ConSurf].
-
[[Category: Chen, L.]]
+
<div style="clear:both"></div>
-
[[Category: Dillard, B D.]]
+
__TOC__
-
[[Category: Fu, Z Q.]]
+
</StructureSection>
-
[[Category: Habel, J.]]
+
[[Category: Large Structures]]
-
[[Category: Horanyi, P.]]
+
-
[[Category: Jr., F E.Jenney.]]
+
-
[[Category: Kelley, L.]]
+
-
[[Category: Lee, D.]]
+
-
[[Category: Lee, H S.]]
+
-
[[Category: Liu, Z J.]]
+
-
[[Category: Nguyen, D.]]
+
-
[[Category: Poole, F L.]]
+
-
[[Category: Rose, J P.]]
+
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
-
[[Category: Shah, N.]]
+
-
[[Category: Sugar, F J.]]
+
-
[[Category: Tempel, W.]]
+
-
[[Category: Wang, B C.]]
+
-
[[Category: Zhang, H.]]
+
-
[[Category: Conserved hypothetical protein]]
+
-
[[Category: Hyperthermophile]]
+
-
[[Category: Pfu-1136390-001]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Secsg]]
+
[[Category: Adams MWW]]
-
[[Category: Southeast collaboratory for structural genomic]]
+
[[Category: Chang J]]
-
[[Category: Structural genomic]]
+
[[Category: Chang S-H]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:29:48 2008''
+
[[Category: Chen L]]
 +
[[Category: Dillard BD]]
 +
[[Category: Fu Z-Q]]
 +
[[Category: Habel J]]
 +
[[Category: Horanyi P]]
 +
[[Category: Jenney Jr FE]]
 +
[[Category: Kelley L]]
 +
[[Category: Lee D]]
 +
[[Category: Lee HS]]
 +
[[Category: Liu Z-J]]
 +
[[Category: Nguyen D]]
 +
[[Category: Poole FL]]
 +
[[Category: Rose JP]]
 +
[[Category: Shah N]]
 +
[[Category: Sugar FJ]]
 +
[[Category: Tempel W]]
 +
[[Category: Wang B-C]]
 +
[[Category: Zhang H]]

Current revision

Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus

PDB ID 2fzf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2fzf"
Personal tools