This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gz4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:30, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gz4.gif|left|200px]]<br /><applet load="2gz4" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2gz4, resolution 1.50&Aring;" />
 
-
'''1.5 A Crystal Structure of a Protein of Unknown Function ATU1052 from Agrobacterium tumefaciens'''<br />
 
-
==About this Structure==
+
==1.5 A Crystal Structure of a Protein of Unknown Function ATU1052 from Agrobacterium tumefaciens==
-
2GZ4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GZ4 OCA].
+
<StructureSection load='2gz4' size='340' side='right'caption='[[2gz4]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
[[Category: Agrobacterium tumefaciens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2gz4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GZ4 FirstGlance]. <br>
-
[[Category: Edwards, A.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gz4 OCA], [https://pdbe.org/2gz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gz4 RCSB], [https://www.ebi.ac.uk/pdbsum/2gz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gz4 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gz4 TOPSAN]</span></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</table>
-
[[Category: Savchenko, A.]]
+
== Function ==
-
[[Category: Xu, X.]]
+
[https://www.uniprot.org/uniprot/Q7D028_AGRFC Q7D028_AGRFC]
-
[[Category: Zhang, R.]]
+
== Evolutionary Conservation ==
-
[[Category: Zheng, H.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: agrobacterium tumefaciens]]
+
Check<jmol>
-
[[Category: mcsg]]
+
<jmolCheckbox>
-
[[Category: midwest center for structural genomics]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/2gz4_consurf.spt"</scriptWhenChecked>
-
[[Category: protein structure initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: psi]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: structural genomics]]
+
</jmolCheckbox>
-
 
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gz4 ConSurf].
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:36:31 2008''
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Agrobacterium fabrum str. C58]]
 +
[[Category: Large Structures]]
 +
[[Category: Edwards A]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Savchenko A]]
 +
[[Category: Xu X]]
 +
[[Category: Zhang R]]
 +
[[Category: Zheng H]]

Current revision

1.5 A Crystal Structure of a Protein of Unknown Function ATU1052 from Agrobacterium tumefaciens

PDB ID 2gz4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools