This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3nyd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:02, 14 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3nyd.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Kemp Eliminase HG-2 Complexed with Transition State Analog 5-Nitro Benzotriazole==
-
The line below this paragraph, containing "STRUCTURE_3nyd", creates the "Structure Box" on the page.
+
<StructureSection load='3nyd' size='340' side='right'caption='[[3nyd]], [[Resolution|resolution]] 1.23&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3nyd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoascus_aurantiacus Thermoascus aurantiacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NYD FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.23&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3NY:5-NITRO-1H-BENZOTRIAZOLE'>3NY</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3nyd| PDB=3nyd | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nyd OCA], [https://pdbe.org/3nyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nyd RCSB], [https://www.ebi.ac.uk/pdbsum/3nyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nyd ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Kemp Eliminase HG-2 Complexed with Transition State Analog 5-Nitro Benzotriazole===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/XYNA_THEAU XYNA_THEAU]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22357762}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 22357762 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22357762}}
+
-
 
+
-
==About this Structure==
+
-
[[3nyd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoascus_aurantiacus Thermoascus aurantiacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NYD OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022357762</ref><references group="xtra"/>
+
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Thermoascus aurantiacus]]
[[Category: Thermoascus aurantiacus]]
-
[[Category: Kaiser, J T.]]
+
[[Category: Kaiser JT]]
-
[[Category: Lee, T M.]]
+
[[Category: Lee TM]]
-
[[Category: Mayo, S L.]]
+
[[Category: Mayo SL]]
-
[[Category: Privett, H K.]]
+
[[Category: Privett HK]]
-
[[Category: Hydrolase]]
+
-
[[Category: Kemp elimination enzyme]]
+
-
[[Category: Tim barrel]]
+

Current revision

Crystal Structure of Kemp Eliminase HG-2 Complexed with Transition State Analog 5-Nitro Benzotriazole

PDB ID 3nyd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3nyd"
Personal tools