This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ia0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ia0.jpg|left|200px]]
 
-
{{Structure
+
==Transcriptional Regulatory Protein PF0864 From Pyrococcus Furiosus a Member of the ASNC Family (PF0864)==
-
|PDB= 2ia0 |SIZE=350|CAPTION= <scene name='initialview01'>2ia0</scene>, resolution 2.37&Aring;
+
<StructureSection load='2ia0' size='340' side='right'caption='[[2ia0]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=AU:GOLD+ION'>AU</scene>
+
<table><tr><td colspan='2'>[[2ia0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IA0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.37&#8491;</td></tr>
-
|GENE= PF0864 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1522 Lrp], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00344 HTH_ASNC]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ia0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia0 OCA], [https://pdbe.org/2ia0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ia0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ia0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ia0 ProSAT], [https://www.topsan.org/Proteins/SECSG/2ia0 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ia0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia0 OCA], [http://www.ebi.ac.uk/pdbsum/2ia0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ia0 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/REG4_PYRFU REG4_PYRFU]
-
 
+
== Evolutionary Conservation ==
-
'''Transcriptional Regulatory Protein PF0864 From Pyrococcus Furiosus a Member of the ASNC Family (PF0864)'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ia/2ia0_consurf.spt"</scriptWhenChecked>
-
2IA0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IA0 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ia0 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Single protein]]
+
[[Category: Chang J]]
-
[[Category: Chang, J.]]
+
[[Category: Liu ZJ]]
-
[[Category: Genomics, Southeast Collaboratory for Structural.]]
+
[[Category: Rose JP]]
-
[[Category: Liu, Z J.]]
+
[[Category: Structural genomic]]
-
[[Category: Rose, J P.]]
+
[[Category: Wang BC]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Yang H]]
-
[[Category: Wang, B C.]]
+
-
[[Category: Yang, H.]]
+
-
[[Category: asnc]]
+
-
[[Category: pf0864]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: pyrococcus furiosus]]
+
-
[[Category: secsg]]
+
-
[[Category: southeast collaboratory for structural genomic]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:41:28 2008''
+

Current revision

Transcriptional Regulatory Protein PF0864 From Pyrococcus Furiosus a Member of the ASNC Family (PF0864)

PDB ID 2ia0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools