This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ib0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ib0.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a conserved hypothetical protein, rv2844, from Mycobacterium tuberculosis==
-
|PDB= 2ib0 |SIZE=350|CAPTION= <scene name='initialview01'>2ib0</scene>, resolution 2.000&Aring;
+
<StructureSection load='2ib0' size='340' side='right'caption='[[2ib0]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2ib0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IB0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE= Rv2844 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ib0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ib0 OCA], [https://pdbe.org/2ib0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ib0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ib0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ib0 ProSAT], [https://www.topsan.org/Proteins/ISFI/2ib0 TOPSAN]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ib0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ib0 OCA], [http://www.ebi.ac.uk/pdbsum/2ib0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ib0 RCSB]</span>
+
[https://www.uniprot.org/uniprot/O05815_MYCTO O05815_MYCTO]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of a conserved hypothetical protein, rv2844, from Mycobacterium tuberculosis'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/2ib0_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2IB0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IB0 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ib0 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Single protein]]
+
[[Category: Bursey EH]]
-
[[Category: Bursey, E H.]]
+
[[Category: Hung LW]]
-
[[Category: Hung, L W.]]
+
[[Category: Kaviratne T]]
-
[[Category: ISFI, Integrated Center for Structure and Function Innovation.]]
+
[[Category: Kim CY]]
-
[[Category: Kaviratne, T.]]
+
[[Category: Lekin T]]
-
[[Category: Kim, C Y.]]
+
[[Category: Radhakannan T]]
-
[[Category: Lekin, T.]]
+
[[Category: Segelke BW]]
-
[[Category: Radhakannan, T.]]
+
[[Category: Terwilliger TC]]
-
[[Category: Segelke, B W.]]
+
[[Category: Toppani D]]
-
[[Category: TBSGC, TB Structural Genomics Consortium.]]
+
[[Category: Woodruff T]]
-
[[Category: Terwilliger, T C.]]
+
[[Category: Yu M]]
-
[[Category: Toppani, D.]]
+
-
[[Category: Woodruff, T.]]
+
-
[[Category: Yu, M.]]
+
-
[[Category: 4-helix bundle]]
+
-
[[Category: integrated center for structure and function innovation]]
+
-
[[Category: isfi]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tb structural genomics consortium]]
+
-
[[Category: tbsgc]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:41:52 2008''
+

Current revision

Crystal structure of a conserved hypothetical protein, rv2844, from Mycobacterium tuberculosis

PDB ID 2ib0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools