This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ifm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ifm.png|left|200px]]
 
-
{{STRUCTURE_2ifm| PDB=2ifm | SCENE= }}
+
==PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA==
-
 
+
<StructureSection load='2ifm' size='340' side='right'caption='[[2ifm]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
-
===PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ifm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_phage_Xf Xanthomonas phage Xf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFM FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15299811}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Fiber diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ifm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ifm OCA], [https://pdbe.org/2ifm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ifm RCSB], [https://www.ebi.ac.uk/pdbsum/2ifm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ifm ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2ifm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_phage_xf Xanthomonas phage xf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFM OCA].
+
== Function ==
 +
[https://www.uniprot.org/uniprot/CAPSD_BPPF1 CAPSD_BPPF1] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane (By similarity).
==See Also==
==See Also==
-
*[[Virus coat protein|Virus coat protein]]
+
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:015299811</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Xanthomonas phage xf]]
+
[[Category: Xanthomonas phage Xf]]
-
[[Category: Marvin, D A.]]
+
[[Category: Marvin DA]]
-
[[Category: Helical virus]]
+
-
[[Category: Virus]]
+
-
[[Category: Virus coat protein]]
+

Current revision

PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA

PDB ID 2ifm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools