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2ktq

From Proteopedia

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[[Image:2ktq.png|left|200px]]
 
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{{STRUCTURE_2ktq| PDB=2ktq | SCENE= }}
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==OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS==
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<StructureSection load='2ktq' size='340' side='right'caption='[[2ktq]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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===OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2ktq]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KTQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KTQ FirstGlance]. <br>
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{{ABSTRACT_PUBMED_9857206}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCT:2,3-DIDEOXYCYTIDINE+5-TRIPHOSPHATE'>DCT</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ktq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ktq OCA], [https://pdbe.org/2ktq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ktq RCSB], [https://www.ebi.ac.uk/pdbsum/2ktq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ktq ProSAT]</span></td></tr>
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[[2ktq]] is a 3 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KTQ OCA].
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DPO1_THEAQ DPO1_THEAQ]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kt/2ktq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ktq ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[DNA Polymerase I|DNA Polymerase I]]
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*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
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*[[DNA polymerase|DNA polymerase]]
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__TOC__
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</StructureSection>
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==Reference==
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[[Category: Large Structures]]
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<ref group="xtra">PMID:009857206</ref><ref group="xtra">PMID:015258572</ref><references group="xtra"/>
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[[Category: DNA-directed DNA polymerase]]
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[[Category: Thermus aquaticus]]
[[Category: Thermus aquaticus]]
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[[Category: Li, Y.]]
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[[Category: Li Y]]
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[[Category: Waksman, G.]]
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[[Category: Waksman G]]
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[[Category: Large fragement of taq dna polymerase i]]
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[[Category: Protein/dna]]
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[[Category: Transferase-dna complex]]
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Current revision

OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS

PDB ID 2ktq

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