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2p5u
From Proteopedia
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==Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD== | ==Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD== | ||
| - | <StructureSection load='2p5u' size='340' side='right' caption='[[2p5u]], [[Resolution|resolution]] 2.37Å' scene=''> | + | <StructureSection load='2p5u' size='340' side='right'caption='[[2p5u]], [[Resolution|resolution]] 2.37Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2p5u]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2p5u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P5U FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.37Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p5u OCA], [https://pdbe.org/2p5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p5u RCSB], [https://www.ebi.ac.uk/pdbsum/2p5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p5u ProSAT], [https://www.topsan.org/Proteins/RSGI/2p5u TOPSAN]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q5SKQ2_THET8 Q5SKQ2_THET8] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5u_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5u_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5u ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5u ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[UDP-galactose 4-epimerase|UDP-galactose 4-epimerase]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Thermus thermophilus HB8]] |
| - | [[Category: Chen | + | [[Category: Chen L]] |
| - | [[Category: Chrzas | + | [[Category: Chrzas J]] |
| - | [[Category: Dillard | + | [[Category: Dillard B]] |
| - | [[Category: Ebihara | + | [[Category: Ebihara A]] |
| - | [[Category: Fu | + | [[Category: Fu Z-Q]] |
| - | [[Category: Kuramitsu | + | [[Category: Kuramitsu S]] |
| - | + | [[Category: Rose JP]] | |
| - | [[Category: Rose | + | [[Category: Shinkai A]] |
| - | [[Category: Shinkai | + | [[Category: Wang B-C]] |
| - | [[Category: Wang | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | [[Category: Zhao M]] |
| - | [[Category: Zhao | + | |
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Current revision
Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD
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Categories: Large Structures | Thermus thermophilus HB8 | Chen L | Chrzas J | Dillard B | Ebihara A | Fu Z-Q | Kuramitsu S | Rose JP | Shinkai A | Wang B-C | Yokoyama S | Zhao M
