This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2p9k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2p9k.png|left|200px]]
 
-
<!--
+
==Crystal structure of bovine Arp2/3 complex co-crystallized with ATP and crosslinked with glutaraldehyde==
-
The line below this paragraph, containing "STRUCTURE_2p9k", creates the "Structure Box" on the page.
+
<StructureSection load='2p9k' size='340' side='right'caption='[[2p9k]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2p9k]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9K FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_2p9k| PDB=2p9k | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9k OCA], [https://pdbe.org/2p9k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9k RCSB], [https://www.ebi.ac.uk/pdbsum/2p9k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9k ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ARPC5_BOVIN ARPC5_BOVIN] Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9k_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9k ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of bovine Arp2/3 complex co-crystallized with ATP and crosslinked with glutaraldehyde===
+
==See Also==
-
 
+
*[[Actin-related protein 3D structures|Actin-related protein 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17499050}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 17499050 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_17499050}}
+
-
 
+
-
==About this Structure==
+
-
2P9K is a 7 chains structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9K OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:17499050</ref><references group="xtra"/>
+
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Nolen, B J.]]
+
[[Category: Large Structures]]
-
[[Category: Pollard, T D.]]
+
[[Category: Nolen BJ]]
-
[[Category: Actin]]
+
[[Category: Pollard TD]]
-
[[Category: Complex]]
+
-
[[Category: Structural protein]]
+
-
[[Category: Wd repeat]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Apr 19 08:28:06 2009''
+

Current revision

Crystal structure of bovine Arp2/3 complex co-crystallized with ATP and crosslinked with glutaraldehyde

PDB ID 2p9k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools