This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pkf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2pkf" [edit=sysop:move=sysop])
Current revision (09:10, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pkf.png|left|200px]]
 
-
{{STRUCTURE_2pkf| PDB=2pkf | SCENE= }}
+
==Crystal structure of M tuberculosis Adenosine Kinase (apo)==
 +
<StructureSection load='2pkf' size='340' side='right'caption='[[2pkf]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2pkf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PKF FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pkf OCA], [https://pdbe.org/2pkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pkf RCSB], [https://www.ebi.ac.uk/pdbsum/2pkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pkf ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ADOK_MYCTU ADOK_MYCTU] ATP dependent phosphorylation of adenosine to monophosphate derivatives (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pkf_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pkf ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of M tuberculosis Adenosine Kinase (apo)===
+
==See Also==
-
 
+
*[[Adenosine kinase 3D structures|Adenosine kinase 3D structures]]
-
{{ABSTRACT_PUBMED_17597075}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[2pkf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PKF OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:017597075</ref><references group="xtra"/>
+
-
[[Category: Adenosine kinase]]
+
-
[[Category: Mycobacterium tuberculosis]]
+
-
[[Category: Owen, J L.]]
+
-
[[Category: Palaninathan, S K.]]
+
-
[[Category: Reddy, M C.M.]]
+
-
[[Category: Sacchettini, J C.]]
+
-
[[Category: Shetty, N D.]]
+
-
[[Category: TBSGC, TB Structural Genomics Consortium.]]
+
-
[[Category: Watson, M D.]]
+
-
[[Category: Adenosine kinase]]
+
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Structural genomic]]
+
[[Category: Owen JL]]
-
[[Category: Tb structural genomics consortium]]
+
[[Category: Palaninathan SK]]
-
[[Category: Tbsgc]]
+
[[Category: Reddy MCM]]
-
[[Category: Transferase]]
+
[[Category: Sacchettini JC]]
 +
[[Category: Shetty ND]]
 +
[[Category: Watson MD]]

Current revision

Crystal structure of M tuberculosis Adenosine Kinase (apo)

PDB ID 2pkf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools