This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ptf
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2ptf.gif|left|200px]] | ||
| - | + | ==Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN== | |
| - | + | <StructureSection load='2ptf' size='340' side='right'caption='[[2ptf]], [[Resolution|resolution]] 2.35Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2ptf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PTF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PTF FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ptf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ptf OCA], [https://pdbe.org/2ptf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ptf RCSB], [https://www.ebi.ac.uk/pdbsum/2ptf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ptf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ptf TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Y863_METTH Y863_METTH] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | == | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pt/2ptf_consurf.spt"</scriptWhenChecked> | |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Almo | + | </jmolCheckbox> |
| - | [[Category: Bain | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ptf ConSurf]. |
| - | [[Category: Bonanno | + | <div style="clear:both"></div> |
| - | [[Category: Burley | + | __TOC__ |
| - | [[Category: Iizuka | + | </StructureSection> |
| - | + | [[Category: Large Structures]] | |
| - | [[Category: Ozyurt | + | [[Category: Methanothermobacter thermautotrophicus str. Delta H]] |
| - | [[Category: Rutter | + | [[Category: Almo SC]] |
| - | [[Category: Sauder | + | [[Category: Bain KT]] |
| - | [[Category: Smith | + | [[Category: Bonanno JB]] |
| - | [[Category: Wasserman | + | [[Category: Burley SK]] |
| - | + | [[Category: Iizuka M]] | |
| - | + | [[Category: Ozyurt S]] | |
| - | + | [[Category: Rutter M]] | |
| - | + | [[Category: Sauder JM]] | |
| - | + | [[Category: Smith D]] | |
| - | + | [[Category: Wasserman S]] | |
| - | + | ||
| - | + | ||
Current revision
Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN
| |||||||||||
