This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2pw9
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila== | ==Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila== | ||
| - | <StructureSection load='2pw9' size='340' side='right' caption='[[2pw9]], [[Resolution|resolution]] 2.10Å' scene=''> | + | <StructureSection load='2pw9' size='340' side='right'caption='[[2pw9]], [[Resolution|resolution]] 2.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2pw9]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2pw9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfotalea_psychrophila_LSv54 Desulfotalea psychrophila LSv54]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PW9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PW9 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pw9 OCA], [https://pdbe.org/2pw9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pw9 RCSB], [https://www.ebi.ac.uk/pdbsum/2pw9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pw9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pw9 TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/Q6AMB9_DESPS Q6AMB9_DESPS] Necessary for formate dehydrogenase activity.[SAAS:SAAS00093836] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pw9_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pw9_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pw9 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Desulfotalea psychrophila LSv54]] |
| - | [[Category: Almo | + | [[Category: Large Structures]] |
| - | [[Category: Bain | + | [[Category: Almo SC]] |
| - | [[Category: Bonanno | + | [[Category: Bain KT]] |
| - | [[Category: Burley | + | [[Category: Bonanno JB]] |
| - | [[Category: Dickey | + | [[Category: Burley SK]] |
| - | [[Category: Logan | + | [[Category: Dickey M]] |
| - | + | [[Category: Logan C]] | |
| - | [[Category: Romero | + | [[Category: Romero R]] |
| - | [[Category: Sauder | + | [[Category: Sauder JM]] |
| - | [[Category: Smith | + | [[Category: Smith D]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman S]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of a putative formate dehydrogenase accessory protein from Desulfotalea psychrophila
| |||||||||||
Categories: Desulfotalea psychrophila LSv54 | Large Structures | Almo SC | Bain KT | Bonanno JB | Burley SK | Dickey M | Logan C | Romero R | Sauder JM | Smith D | Wasserman S
