This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2pzu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:13, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2pzu.png|left|200px]]
 
-
<!--
+
==Crystal structure of Staphylococcal nuclease variant V66N/P117G/H124L/S128A at cryogenic temperature==
-
The line below this paragraph, containing "STRUCTURE_2pzu", creates the "Structure Box" on the page.
+
<StructureSection load='2pzu' size='340' side='right'caption='[[2pzu]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2pzu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PZU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PZU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_2pzu| PDB=2pzu | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pzu OCA], [https://pdbe.org/2pzu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pzu RCSB], [https://www.ebi.ac.uk/pdbsum/2pzu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pzu ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A5A523_STAAU A5A523_STAAU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pz/2pzu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pzu ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Staphylococcal nuclease variant V66N/P117G/H124L/S128A at cryogenic temperature===
+
==See Also==
-
 
+
*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18178652}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 18178652 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_18178652}}
+
-
 
+
-
==About this Structure==
+
-
2PZU is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PZU OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18178652</ref><references group="xtra"/>
+
-
[[Category: Micrococcal nuclease]]
+
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Abe, C.]]
+
[[Category: Abe C]]
-
[[Category: Garcia-Moreno, E B.]]
+
[[Category: Garcia-Moreno EB]]
-
[[Category: Schlessman, J L.]]
+
[[Category: Schlessman JL]]
-
[[Category: Hydrolase]]
+
-
[[Category: Hyperstable variant]]
+
-
[[Category: Internal water]]
+
-
[[Category: Nuclease]]
+
-
[[Category: Staphylococcal nuclease]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:34:23 2009''
+

Current revision

Crystal structure of Staphylococcal nuclease variant V66N/P117G/H124L/S128A at cryogenic temperature

PDB ID 2pzu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools