This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qen

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 2qen is ON HOLD until Jun 26 2009 Authors: Uhring, M., Bey, G., Lecompte, O., Moras, D., Poch, O., Cavarelli, J. Description: The walker-type atpas...)
Current revision (09:15, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 2qen is ON HOLD until Jun 26 2009
+
==The walker-type atpase paby2304 of pyrococcus abyssi==
 +
<StructureSection load='2qen' size='340' side='right'caption='[[2qen]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2qen]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QEN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QEN FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qen FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qen OCA], [https://pdbe.org/2qen PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qen RCSB], [https://www.ebi.ac.uk/pdbsum/2qen PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qen ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9V2L3_PYRAB Q9V2L3_PYRAB]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qe/2qen_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qen ConSurf].
 +
<div style="clear:both"></div>
-
Authors: Uhring, M., Bey, G., Lecompte, O., Moras, D., Poch, O., Cavarelli, J.
+
==See Also==
-
 
+
*[[ATPase 3D structures|ATPase 3D structures]]
-
Description: The walker-type atpase paby2304 of pyrococcus abyssi
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 11 08:37:22 2008''
+
[[Category: Pyrococcus abyssi]]
 +
[[Category: Bey G]]
 +
[[Category: Cavarelli J]]
 +
[[Category: Lecompte O]]
 +
[[Category: Moras D]]
 +
[[Category: Poch O]]
 +
[[Category: Uhring M]]

Current revision

The walker-type atpase paby2304 of pyrococcus abyssi

PDB ID 2qen

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools