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2qfn

From Proteopedia

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{{Seed}}
 
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[[Image:2qfn.png|left|200px]]
 
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==X-ray Crystal Structure Analysis of the Binding Site in the Ferric and Oxyferrous Forms of the Recombinant Heme Dehaloperoxidase Cloned from Amphitrite ornata==
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The line below this paragraph, containing "STRUCTURE_2qfn", creates the "Structure Box" on the page.
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<StructureSection load='2qfn' size='340' side='right'caption='[[2qfn]], [[Resolution|resolution]] 1.62&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2qfn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QFN FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.62&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2qfn| PDB=2qfn | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qfn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qfn OCA], [https://pdbe.org/2qfn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qfn RCSB], [https://www.ebi.ac.uk/pdbsum/2qfn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qfn ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9NAV8_9ANNE Q9NAV8_9ANNE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/2qfn_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qfn ConSurf].
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<div style="clear:both"></div>
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===X-ray Crystal Structure Analysis of the Binding Site in the Ferric and Oxyferrous Forms of the Recombinant Heme Dehaloperoxidase Cloned from Amphitrite ornata===
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==See Also==
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*[[Dehaloperoxidase 3D structures|Dehaloperoxidase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_17881827}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 17881827 is the PubMed ID number.
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{{ABSTRACT_PUBMED_17881827}}
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==About this Structure==
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2QFN is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QFN OCA].
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==Reference==
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<ref group="xtra">PMID:17881827</ref><references group="xtra"/>
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[[Category: Amphitrite ornata]]
[[Category: Amphitrite ornata]]
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[[Category: Chen, Z.]]
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[[Category: Large Structures]]
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[[Category: Davis, M F.]]
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[[Category: Chen Z]]
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[[Category: Franzen, S.]]
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[[Category: Davis MF]]
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[[Category: Serrano, V de.]]
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[[Category: Franzen S]]
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[[Category: Dehaloperoxidase]]
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[[Category: De Serrano V]]
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[[Category: Dhp]]
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[[Category: Globin]]
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[[Category: Heme protein]]
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[[Category: Transport protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 03:34:04 2009''
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Current revision

X-ray Crystal Structure Analysis of the Binding Site in the Ferric and Oxyferrous Forms of the Recombinant Heme Dehaloperoxidase Cloned from Amphitrite ornata

PDB ID 2qfn

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