This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qh5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori==
==Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori==
-
<StructureSection load='2qh5' size='340' side='right' caption='[[2qh5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='2qh5' size='340' side='right'caption='[[2qh5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2qh5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori Campylobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QH5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QH5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2qh5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QH5 FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HP_0043 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85962 Campylobacter pylori])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qh5 OCA], [http://pdbe.org/2qh5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qh5 RCSB], [http://www.ebi.ac.uk/pdbsum/2qh5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qh5 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2qh5 TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qh5 OCA], [https://pdbe.org/2qh5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qh5 RCSB], [https://www.ebi.ac.uk/pdbsum/2qh5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qh5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qh5 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O24884_HELPY O24884_HELPY]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qh5_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qh5_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 19: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Campylobacter pylori]]
+
[[Category: Helicobacter pylori 26695]]
-
[[Category: Almo, S C]]
+
[[Category: Large Structures]]
-
[[Category: Burley, S K]]
+
[[Category: Almo SC]]
-
[[Category: Dickey, M]]
+
[[Category: Burley SK]]
-
[[Category: Iizuka, M]]
+
[[Category: Dickey M]]
-
[[Category: Koss, J]]
+
[[Category: Iizuka M]]
-
[[Category: Maletic, M]]
+
[[Category: Koss J]]
-
[[Category: Structural genomic]]
+
[[Category: Maletic M]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Patskovsky Y]]
-
[[Category: Ramagopal, U]]
+
[[Category: Ramagopal U]]
-
[[Category: Sauder, J M]]
+
[[Category: Sauder JM]]
-
[[Category: Toro, R]]
+
[[Category: Toro R]]
-
[[Category: Wasserman, S R]]
+
[[Category: Wasserman SR]]
-
[[Category: Isomerase]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori

PDB ID 2qh5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools