This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qh5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qh5.gif|left|200px]]
 
-
<!--
+
==Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori==
-
The line below this paragraph, containing "STRUCTURE_2qh5", creates the "Structure Box" on the page.
+
<StructureSection load='2qh5' size='340' side='right'caption='[[2qh5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qh5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QH5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qh5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qh5 OCA], [https://pdbe.org/2qh5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qh5 RCSB], [https://www.ebi.ac.uk/pdbsum/2qh5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qh5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qh5 TOPSAN]</span></td></tr>
-
{{STRUCTURE_2qh5| PDB=2qh5 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori'''
+
[https://www.uniprot.org/uniprot/O24884_HELPY O24884_HELPY]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2QH5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QH5 OCA].
+
<jmolCheckbox>
-
[[Category: Helicobacter pylori]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qh/2qh5_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Almo, S C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: Dickey, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qh5 ConSurf].
-
[[Category: Iizuka, M.]]
+
<div style="clear:both"></div>
-
[[Category: Koss, J.]]
+
__TOC__
-
[[Category: Maletic, M.]]
+
</StructureSection>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Helicobacter pylori 26695]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Ramagopal, U.]]
+
[[Category: Almo SC]]
-
[[Category: Sauder, J M.]]
+
[[Category: Burley SK]]
-
[[Category: Toro, R.]]
+
[[Category: Dickey M]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Iizuka M]]
-
[[Category: Isomerase]]
+
[[Category: Koss J]]
-
[[Category: New york structural genomics research consortium]]
+
[[Category: Maletic M]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Patskovsky Y]]
-
[[Category: Nysgrc]]
+
[[Category: Ramagopal U]]
-
[[Category: Nysgxrc]]
+
[[Category: Sauder JM]]
-
[[Category: Protein structure initiative]]
+
[[Category: Toro R]]
-
[[Category: Psi]]
+
[[Category: Wasserman SR]]
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 14:57:56 2008''
+

Current revision

Crystal structure of mannose-6-phosphate isomerase from Helicobacter pylori

PDB ID 2qh5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools