This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qlc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qlc.png|left|200px]]
 
-
<!--
+
==The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS==
-
The line below this paragraph, containing "STRUCTURE_2qlc", creates the "Structure Box" on the page.
+
<StructureSection load='2qlc' size='340' side='right'caption='[[2qlc]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qlc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum_TLS Chlorobaculum tepidum TLS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QLC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlc OCA], [https://pdbe.org/2qlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qlc RCSB], [https://www.ebi.ac.uk/pdbsum/2qlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qlc ProSAT], [https://www.topsan.org/Proteins/MCSG/2qlc TOPSAN]</span></td></tr>
-
{{STRUCTURE_2qlc| PDB=2qlc | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS===
+
[https://www.uniprot.org/uniprot/Y611_CHLTE Y611_CHLTE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2QLC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chlorobium_tepidum_tls Chlorobium tepidum tls]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA].
+
<jmolCheckbox>
-
[[Category: Chlorobium tepidum tls]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2qlc_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Clancy, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Duggan, E.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qlc ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Zhang, R.]]
+
__TOC__
-
[[Category: Dna binding protein]]
+
</StructureSection>
-
[[Category: Dna repair protein]]
+
[[Category: Chlorobaculum tepidum TLS]]
-
[[Category: Mcsg]]
+
[[Category: Large Structures]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Clancy S]]
-
[[Category: Protein structure initiative]]
+
[[Category: Duggan E]]
-
[[Category: Psi-2]]
+
[[Category: Joachimiak A]]
-
[[Category: Radc]]
+
[[Category: Zhang R]]
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 01:12:01 2008''
+

Current revision

The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS

PDB ID 2qlc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qlc"
Personal tools