2qtk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:17, 21 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qtk.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_2qtk", creates the "Structure Box" on the page.
+
<StructureSection load='2qtk' size='340' side='right'caption='[[2qtk]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qtk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QTK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
-
{{STRUCTURE_2qtk| PDB=2qtk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qtk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qtk OCA], [https://pdbe.org/2qtk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qtk RCSB], [https://www.ebi.ac.uk/pdbsum/2qtk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qtk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9HUR5_PSEAE Q9HUR5_PSEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qtk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qtk ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa'''
+
==See Also==
-
 
+
*[[Porin 3D structures|Porin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2QTK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA].
+
[[Category: Large Structures]]
-
[[Category: Pseudomonas aeruginosa]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Single protein]]
+
[[Category: Biswas S]]
-
[[Category: Berg, B Van den.]]
+
[[Category: Van den Berg B]]
-
[[Category: Biswas, S.]]
+
-
[[Category: Beta barrel]]
+
-
[[Category: Outer membrane protein]]
+
-
[[Category: Porin]]
+
-
[[Category: Vanillate transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 25 18:48:15 2008''
+

Current revision

Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa

PDB ID 2qtk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qtk"
Personal tools