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2ree

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[[Image:2ree.jpg|left|200px]]
 
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==Crystal structure of the loading GNATL domain of CurA from Lyngbya majuscula==
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The line below this paragraph, containing "STRUCTURE_2ree", creates the "Structure Box" on the page.
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<StructureSection load='2ree' size='340' side='right'caption='[[2ree]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2ree]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Moorena_producens_19L Moorena producens 19L]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2REE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2REE FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2ree| PDB=2ree | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ree FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ree OCA], [https://pdbe.org/2ree PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ree RCSB], [https://www.ebi.ac.uk/pdbsum/2ree PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ree ProSAT]</span></td></tr>
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</table>
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'''Crystal structure of the loading GNATL domain of CurA from Lyngbya majuscula'''
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== Function ==
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[https://www.uniprot.org/uniprot/Q6DNF2_9CYAN Q6DNF2_9CYAN]
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== Evolutionary Conservation ==
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==Overview==
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[[Image:Consurf_key_small.gif|200px|right]]
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An unexpected biochemical strategy for chain initiation is described for the loading module of the polyketide synthase of curacin A, an anticancer lead derived from the marine cyanobacterium Lyngbya majuscula. A central GCN5-related N-acetyltransferase (GNAT) domain bears bifunctional decarboxylase/S-acetyltransferase activity, both unprecedented for the GNAT superfamily. A CurA loading tridomain, consisting of an adaptor domain, the GNAT domain, and an acyl carrier protein, was assessed biochemically, revealing that a domain showing homology to GNAT (GNAT(L)) catalyzes (i) decarboxylation of malonyl-coenzyme A (malonyl-CoA) to acetyl-CoA and (ii) direct S-acetyl transfer from acetyl-CoA to load an adjacent acyl carrier protein domain (ACP(L)). Moreover, the N-terminal adapter domain was shown to facilitate acetyl-group transfer. Crystal structures of GNAT(L) were solved at 1.95 angstroms (ligand-free form) and 2.75 angstroms (acyl-CoA complex), showing distinct substrate tunnels for acyl-CoA and holo-ACP(L) binding. Modeling and site-directed mutagenesis experiments demonstrated that histidine-389 and threonine-355, at the convergence of the CoA and ACP tunnels, participate in malonyl-CoA decarboxylation but not in acetyl-group transfer. Decarboxylation precedes acetyl-group transfer, leading to acetyl-ACP(L) as the key curacin A starter unit.
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/re/2ree_consurf.spt"</scriptWhenChecked>
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2REE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lyngbya_majuscula Lyngbya majuscula]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2REE OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==Reference==
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</jmolCheckbox>
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GNAT-like strategy for polyketide chain initiation., Gu L, Geders TW, Wang B, Gerwick WH, Hakansson K, Smith JL, Sherman DH, Science. 2007 Nov 9;318(5852):970-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17991863 17991863]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ree ConSurf].
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[[Category: Lyngbya majuscula]]
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<div style="clear:both"></div>
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[[Category: Single protein]]
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__TOC__
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[[Category: Geders, T W.]]
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</StructureSection>
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[[Category: Smith, J L.]]
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[[Category: Large Structures]]
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[[Category: Curacin]]
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[[Category: Moorena producens 19L]]
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[[Category: Decarboxylase]]
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[[Category: Geders TW]]
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[[Category: Gnat]]
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[[Category: Smith JL]]
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[[Category: Loading]]
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[[Category: Lyase]]
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[[Category: Phosphopantetheine]]
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[[Category: Polyketide synthase]]
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[[Category: S-acetyltransferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 16:44:37 2008''
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Current revision

Crystal structure of the loading GNATL domain of CurA from Lyngbya majuscula

PDB ID 2ree

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