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2ret

From Proteopedia

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{{Seed}}
 
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[[Image:2ret.png|left|200px]]
 
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==The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus==
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The line below this paragraph, containing "STRUCTURE_2ret", creates the "Structure Box" on the page.
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<StructureSection load='2ret' size='340' side='right'caption='[[2ret]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2ret]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_vulnificus Vibrio vulnificus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RET OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RET FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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{{STRUCTURE_2ret| PDB=2ret | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ret FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ret OCA], [https://pdbe.org/2ret PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ret RCSB], [https://www.ebi.ac.uk/pdbsum/2ret PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ret ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7MPZ1_VIBVY Q7MPZ1_VIBVY]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/re/2ret_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ret ConSurf].
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<div style="clear:both"></div>
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===The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus===
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==See Also==
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*[[Pseudopilin|Pseudopilin]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_18022192}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18022192 is the PubMed ID number.
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{{ABSTRACT_PUBMED_18022192}}
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==About this Structure==
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2RET is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Vibrio_vulnificus Vibrio vulnificus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RET OCA].
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==Reference==
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The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the type 2 secretion system of Vibrio vulnificus., Yanez ME, Korotkov KV, Abendroth J, Hol WG, J Mol Biol. 2008 Jan 11;375(2):471-86. Epub 2007 Oct 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18022192 18022192]
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[[Category: Protein complex]]
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[[Category: Vibrio vulnificus]]
[[Category: Vibrio vulnificus]]
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[[Category: Abendroth, J.]]
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[[Category: Abendroth J]]
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[[Category: Hol, W G.J.]]
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[[Category: Hol WGJ]]
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[[Category: Korotkov, K V.]]
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[[Category: Korotkov KV]]
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[[Category: Yanez, M E.]]
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[[Category: Yanez ME]]
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[[Category: Cholera]]
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[[Category: General secretion pathway]]
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[[Category: Methylation]]
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[[Category: Protein transport]]
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[[Category: Pseudopilus]]
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[[Category: Type 4 pilin biogenesis]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 15:37:27 2008''
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Current revision

The crystal structure of a binary complex of two pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus

PDB ID 2ret

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