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3bit

From Proteopedia

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[[Image:3bit.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of yeast Spt16 N-terminal Domain==
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|PDB= 3bit |SIZE=350|CAPTION= <scene name='initialview01'>3bit</scene>, resolution 1.900&Aring;
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<StructureSection load='3bit' size='340' side='right'caption='[[3bit]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
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<table><tr><td colspan='2'>[[3bit]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BIT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BIT FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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|GENE= SPT16, CDC68, SSF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bit OCA], [https://pdbe.org/3bit PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bit RCSB], [https://www.ebi.ac.uk/pdbsum/3bit PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bit ProSAT]</span></td></tr>
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</table>
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'''Crystal structure of yeast Spt16 N-terminal Domain'''
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== Function ==
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[https://www.uniprot.org/uniprot/SPT16_YEAST SPT16_YEAST]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3BIT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BIT OCA].
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bi/3bit_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bit ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Single protein]]
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[[Category: Bentley S]]
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[[Category: Bentley, S.]]
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[[Category: David SJ]]
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[[Category: David, S J.]]
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[[Category: Formosa T]]
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[[Category: Formosa, T.]]
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[[Category: Heroux A]]
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[[Category: Heroux, A.]]
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[[Category: Hill CP]]
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[[Category: Hill, C P.]]
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[[Category: McCullough L]]
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[[Category: McCullough, L.]]
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[[Category: Rawlins R]]
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[[Category: Rawlins, R.]]
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[[Category: VanDemark AP]]
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[[Category: VanDemark, A P.]]
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[[Category: Xin H]]
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[[Category: Xin, H.]]
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[[Category: BME]]
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[[Category: CL]]
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[[Category: GOL]]
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[[Category: activator]]
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[[Category: aminopeptidase]]
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[[Category: chromatin]]
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[[Category: chromosomal protein]]
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[[Category: coiled coil]]
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[[Category: dna damage]]
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[[Category: dna repair]]
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[[Category: dna replication]]
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[[Category: fact]]
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[[Category: nucleus]]
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[[Category: phosphoprotein]]
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[[Category: pita-bread]]
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[[Category: replication]]
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[[Category: repressor]]
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[[Category: transcription]]
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[[Category: transcription regulation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:59:21 2008''
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Current revision

Crystal structure of yeast Spt16 N-terminal Domain

PDB ID 3bit

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OCA

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