This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cs3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:37, 21 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3cs3.png|left|200px]]
 
-
<!--
+
==Crystal structure of sugar-binding transcriptional regulator (LacI family) from Enterococcus faecalis==
-
The line below this paragraph, containing "STRUCTURE_3cs3", creates the "Structure Box" on the page.
+
<StructureSection load='3cs3' size='340' side='right'caption='[[3cs3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3cs3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CS3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3cs3| PDB=3cs3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cs3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cs3 OCA], [https://pdbe.org/3cs3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cs3 RCSB], [https://www.ebi.ac.uk/pdbsum/3cs3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cs3 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cs3 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of sugar-binding transcriptional regulator (LacI family) from Enterococcus faecalis===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q835X8_ENTFA Q835X8_ENTFA]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3CS3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CS3 OCA].
+
Check<jmol>
-
[[Category: Enterococcus faecalis v583]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cs/3cs3_consurf.spt"</scriptWhenChecked>
-
[[Category: Almo, S C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Burley, S K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Freeman, J.]]
+
</jmolCheckbox>
-
[[Category: Groshong, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cs3 ConSurf].
-
[[Category: Iizuka, M.]]
+
<div style="clear:both"></div>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
__TOC__
-
[[Category: Patskovsky, Y.]]
+
</StructureSection>
-
[[Category: Romero, R.]]
+
[[Category: Enterococcus faecalis V583]]
-
[[Category: Sauder, J M.]]
+
[[Category: Large Structures]]
-
[[Category: Smith, D.]]
+
[[Category: Almo SC]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Burley SK]]
-
[[Category: Dna-binding]]
+
[[Category: Freeman J]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Groshong C]]
-
[[Category: Nysgxrc]]
+
[[Category: Iizuka M]]
-
[[Category: Protein structure initiative]]
+
[[Category: Patskovsky Y]]
-
[[Category: Psi-2]]
+
[[Category: Romero R]]
-
[[Category: Structural genomic]]
+
[[Category: Sauder JM]]
-
[[Category: Sugar-binding transcriptional regulator]]
+
[[Category: Smith D]]
-
[[Category: Transcription regulation]]
+
[[Category: Wasserman SR]]
-
[[Category: Transcription regulator]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 19:05:22 2008''
+

Current revision

Crystal structure of sugar-binding transcriptional regulator (LacI family) from Enterococcus faecalis

PDB ID 3cs3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3cs3"
Personal tools