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3ctp

From Proteopedia

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(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_3ctp", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
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[[Image:3ctp.jpg|left|200px]]
 
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==Crystal structure of periplasmic binding protein/LacI transcriptional regulator from Alkaliphilus metalliredigens QYMF complexed with D-xylulofuranose==
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The line below this paragraph, containing "STRUCTURE_3ctp", creates the "Structure Box" on the page.
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<StructureSection load='3ctp' size='340' side='right'caption='[[3ctp]], [[Resolution|resolution]] 1.41&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ctp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkaliphilus_metalliredigens_QYMF Alkaliphilus metalliredigens QYMF]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CTP FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.41&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=XLF:BETA-D-XYLULOFURANOSE'>XLF</scene></td></tr>
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{{STRUCTURE_3ctp| PDB=3ctp | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ctp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ctp OCA], [https://pdbe.org/3ctp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ctp RCSB], [https://www.ebi.ac.uk/pdbsum/3ctp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ctp ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3ctp TOPSAN]</span></td></tr>
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</table>
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'''Crystal structure of periplasmic binding protein/LacI transcriptional regulator from Alkaliphilus metalliredigens QYMF complexed with D-xylulofuranose'''
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== Function ==
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[https://www.uniprot.org/uniprot/A6TKU5_ALKMQ A6TKU5_ALKMQ]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3CTP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Alkaliphilus_metalliredigens_qymf Alkaliphilus metalliredigens qymf]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CTP OCA].
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Check<jmol>
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[[Category: Alkaliphilus metalliredigens qymf]]
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<jmolCheckbox>
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[[Category: Single protein]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ct/3ctp_consurf.spt"</scriptWhenChecked>
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[[Category: Almo, S C.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Burley, S K.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Malashkevich, V N.]]
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</jmolCheckbox>
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[[Category: Meyer, A.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ctp ConSurf].
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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<div style="clear:both"></div>
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[[Category: Sauder, J M.]]
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__TOC__
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[[Category: Toro, R.]]
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</StructureSection>
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[[Category: Wasserman, S R.]]
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[[Category: Alkaliphilus metalliredigens QYMF]]
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[[Category: Crystal structure]]
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[[Category: Large Structures]]
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[[Category: D-xylulofuranose]]
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[[Category: Almo SC]]
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[[Category: Dna-binding]]
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[[Category: Burley SK]]
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[[Category: L-xylulose]]
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[[Category: Malashkevich VN]]
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[[Category: New york structural genomix research consortium]]
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[[Category: Meyer A]]
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[[Category: Nysgxrc]]
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[[Category: Sauder JM]]
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[[Category: Protein structure initiative]]
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[[Category: Toro R]]
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[[Category: Psi-2]]
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[[Category: Wasserman SR]]
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[[Category: Structural genomic]]
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[[Category: Transcription regulation]]
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[[Category: Transcription regulator]]
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[[Category: Transcriptional regulator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 7 08:57:13 2008''
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Current revision

Crystal structure of periplasmic binding protein/LacI transcriptional regulator from Alkaliphilus metalliredigens QYMF complexed with D-xylulofuranose

PDB ID 3ctp

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