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3cyj

From Proteopedia

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{{Seed}}
 
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[[Image:3cyj.png|left|200px]]
 
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==Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus==
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The line below this paragraph, containing "STRUCTURE_3cyj", creates the "Structure Box" on the page.
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<StructureSection load='3cyj' size='340' side='right'caption='[[3cyj]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3cyj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rubrobacter_xylanophilus_DSM_9941 Rubrobacter xylanophilus DSM 9941]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CYJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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{{STRUCTURE_3cyj| PDB=3cyj | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cyj OCA], [https://pdbe.org/3cyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cyj RCSB], [https://www.ebi.ac.uk/pdbsum/3cyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cyj ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cyj TOPSAN]</span></td></tr>
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</table>
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===Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus===
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== Function ==
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[https://www.uniprot.org/uniprot/Q1ASJ4_RUBXD Q1ASJ4_RUBXD]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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3CYJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Rubrobacter_xylanophilus_dsm_9941 Rubrobacter xylanophilus dsm 9941]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CYJ OCA].
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Check<jmol>
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[[Category: Rubrobacter xylanophilus dsm 9941]]
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<jmolCheckbox>
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[[Category: Almo, S C.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/3cyj_consurf.spt"</scriptWhenChecked>
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[[Category: Bain, K T.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Bonanno, J B.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Bravo, J.]]
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</jmolCheckbox>
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[[Category: Burley, S K.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cyj ConSurf].
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[[Category: Freeman, J.]]
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<div style="clear:both"></div>
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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__TOC__
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[[Category: Sauder, J M.]]
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</StructureSection>
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[[Category: Smith, D.]]
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[[Category: Large Structures]]
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[[Category: Wasserman, S.]]
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[[Category: Rubrobacter xylanophilus DSM 9941]]
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[[Category: Zhang, F.]]
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[[Category: Almo SC]]
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[[Category: Isomerase]]
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[[Category: Bain KT]]
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[[Category: New york sgx research center for structural genomic]]
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[[Category: Bonanno JB]]
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[[Category: Nysgxrc]]
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[[Category: Bravo J]]
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[[Category: Protein structure initiative]]
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[[Category: Burley SK]]
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[[Category: Psi-2]]
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[[Category: Freeman J]]
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[[Category: Structural genomic]]
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[[Category: Sauder JM]]
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[[Category: Smith D]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 24 11:07:50 2008''
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[[Category: Wasserman S]]
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[[Category: Zhang F]]

Current revision

Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus

PDB ID 3cyj

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