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3dhu
From Proteopedia
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==Crystal structure of an alpha-amylase from Lactobacillus plantarum== | ==Crystal structure of an alpha-amylase from Lactobacillus plantarum== | ||
| - | <StructureSection load='3dhu' size='340' side='right' caption='[[3dhu]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='3dhu' size='340' side='right'caption='[[3dhu]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3dhu]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dhu]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DHU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DHU FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dhu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dhu OCA], [https://pdbe.org/3dhu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dhu RCSB], [https://www.ebi.ac.uk/pdbsum/3dhu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dhu ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3dhu TOPSAN]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/F9USZ1_LACPL F9USZ1_LACPL] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dh/3dhu_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dh/3dhu_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dhu ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Amylase|Amylase | + | *[[Amylase 3D structures|Amylase 3D structures]] |
| - | + | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Lactiplantibacillus plantarum]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Almo SC]] |
| - | [[Category: Bain | + | [[Category: Bain KT]] |
| - | [[Category: Bonanno | + | [[Category: Bonanno JB]] |
| - | [[Category: Burley | + | [[Category: Burley SK]] |
| - | [[Category: Dickey | + | [[Category: Dickey M]] |
| - | [[Category: Iizuka | + | [[Category: Iizuka M]] |
| - | + | [[Category: Ozyurt S]] | |
| - | [[Category: Ozyurt | + | [[Category: Sauder JM]] |
| - | [[Category: Sauder | + | [[Category: Smith D]] |
| - | [[Category: Smith | + | [[Category: Wasserman S]] |
| - | [[Category: Wasserman | + | |
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Current revision
Crystal structure of an alpha-amylase from Lactobacillus plantarum
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Categories: Lactiplantibacillus plantarum | Large Structures | Almo SC | Bain KT | Bonanno JB | Burley SK | Dickey M | Iizuka M | Ozyurt S | Sauder JM | Smith D | Wasserman S
